Genomic assessment of local adaptation in dwarf birch to inform assisted gene flow

Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections

(2019) Orly Razgour et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparing methods for detecting multilocus adaptation with multivariate genotype-environment associations

(2018) Brenna R. Forester et al.   MOLECULAR ECOLOGY

The search for loci under selection: trends, biases and progress

(2018) Collin W. Ahrens et al.   MOLECULAR ECOLOGY

Tetrapods on the EDGE: Overcoming data limitations to identify phylogenetic conservation priorities

(2018) Rikki Gumbs et al.   PLoS One

Is the sky the limit? On the expansion threshold of a species’ range

(2018) Jitka Polechová   PLOS BIOLOGY

Improving conservation policy with genomics: a guide to integrating adaptive potential into U.S. Endangered Species Act decisions for conservation practitioners and geneticists

(2018) W. C. Funk et al.   CONSERVATION GENETICS

Genetic diversity maintained among fragmented populations of a tree undergoing range contraction

(2018) James S. Borrell et al.   HEREDITY

The Peril of Gene-Targeted Conservation

(2018) Marty Kardos et al.   TRENDS IN ECOLOGY & EVOLUTION

Severe consequences of habitat fragmentation on genetic diversity of an endangered Australian freshwater fish: A call for assisted gene flow

(2017) Alexandra Pavlova et al.   Evolutionary Applications

Next-generation metrics for monitoring genetic erosion within populations of conservation concern

(2017) Gregoire Leroy et al.   Evolutionary Applications

Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation

(2017) Sarah P. Flanagan et al.   Evolutionary Applications

Revisiting Adaptive Potential, Population Size, and Conservation

(2017) Ary A. Hoffmann et al.   TRENDS IN ECOLOGY & EVOLUTION

Genomic models predict successful coral adaptation if future ocean warming rates are reduced

(2017) Rachael A. Bay et al.   Science Advances

Adapting to a warming world: Ecological restoration, climate change, and genomics

(2016) Kathryn A. Hodgins et al.   AMERICAN JOURNAL OF BOTANY

Do Ecological Niche Models Accurately Identify Climatic Determinants of Species Ranges?

(2016) Christopher A. Searcy et al.   AMERICAN NATURALIST

Addressing potential local adaptation in species distribution models: implications for conservation under climate change

(2016) Maria Helena Hällfors et al.   ECOLOGICAL APPLICATIONS

Can local adaptation research in plants inform selection of native plant materials? An analysis of experimental methodologies

(2016) Alexis L. Gibson et al.   Evolutionary Applications

Conservation of genetic uniqueness of populations may increase extinction likelihood of endangered species: the case of Australian mammals

(2016) Andrew R. Weeks et al.   Frontiers in Zoology

Signatures of local adaptation in candidate genes of oaks (Quercusspp.) with respect to present and future climatic conditions

(2016) Christian Rellstab et al.   MOLECULAR ECOLOGY

Unidirectional diploid-tetraploid introgression among British birch trees with shifting ranges shown by restriction site-associated markers

(2016) Jasmin Zohren et al.   MOLECULAR ECOLOGY

Controlling false discoveries in genome scans for selection

(2016) Olivier François et al.   MOLECULAR ECOLOGY

Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation

(2016) David B. Lowry et al.   Molecular Ecology Resources

The challenge of separating signatures of local adaptation from those of isolation by distance and colonization history: The case of two white pines

(2016) Simon Nadeau et al.   Ecology and Evolution

Genetic markers for antioxidant capacity in a reef-building coral

(2016) Y. K. Jin et al.   Science Advances

Modeling Species and Community Responses to Past, Present, and Future Episodes of Climatic and Ecological Change

(2015) Kaitlin C. Maguire et al.   Annual Review of Ecology Evolution and Systematics

Time to get moving: assisted gene flow of forest trees

(2015) Sally N. Aitken et al.   Evolutionary Applications

Isolation by environment in White-breasted Nuthatches (Sitta carolinensis) of the Madrean Archipelago sky islands: a landscape genomics approach

(2015) Joseph D. Manthey et al.   MOLECULAR ECOLOGY

A practical guide to environmental association analysis in landscape genomics

(2015) Christian Rellstab et al.   MOLECULAR ECOLOGY

Genetic rescue of small inbred populations: meta-analysis reveals large and consistent benefits of gene flow

(2015) Richard Frankham   MOLECULAR ECOLOGY

Population differentiation determined from putative neutral and divergent adaptive genetic markers in Eulachon (Thaleichthys pacificus, Osmeridae), an anadromous Pacific smelt

(2015) John R. Candy et al.   Molecular Ecology Resources

Seed Sourcing for Restoration in an Era of Climate Change

(2015) Kayri Havens et al.   NATURAL AREAS JOURNAL

Limits to adaptation along environmental gradients

(2015) Jitka Polechová et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accelerating extinction risk from climate change

(2015) M. C. Urban   SCIENCE

Towards the identification of the loci of adaptive evolution

(2015) Carolina Pardo-Diaz et al.   Methods in Ecology and Evolution

On the selection of thresholds for predicting species occurrence with presence-only data

(2015) Canran Liu et al.   Ecology and Evolution

Landscape genomics reveal signatures of local adaptation in barley (Hordeum vulgare L.)

(2015) Tiegist D. Abebe et al.   Frontiers in Plant Science

Global Distribution and Conservation of Evolutionary Distinctness in Birds

(2014) Walter Jetz et al.   CURRENT BIOLOGY

Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation

(2014) Matthew C. Fitzpatrick et al.   ECOLOGY LETTERS

Using genomics to characterize evolutionary potential for conservation of wild populations

(2014) Katherine A. Harrisson et al.   Evolutionary Applications

Evolutionary conservation-evaluating the adaptive potential of species

(2014) Christophe Eizaguirre et al.   Evolutionary Applications

Molecular footprints of the Holocene retreat of dwarf birch in Britain

(2014) Nian Wang et al.   MOLECULAR ECOLOGY

Prioritizing Populations for Conservation Using Phylogenetic Networks

(2014) Logan Volkmann et al.   PLoS One

Assisted Gene Flow to Facilitate Local Adaptation to Climate Change

(2013) Sally N. Aitken et al.   Annual Review of Ecology Evolution and Systematics

More than the sum of the parts: forest climate response from joint species distribution models

(2013) James S. Clark et al.   ECOLOGICAL APPLICATIONS

Robust Identification of Local Adaptation from Allele Frequencies

(2013) T. Gunther et al.   GENETICS

Potential for evolutionary responses to climate change - evidence from tree populations

(2013) Florian J. Alberto et al.   GLOBAL CHANGE BIOLOGY

Pervasive selection or is it…? why areFSToutliers sometimes so frequent?

(2013) Nicolas Bierne et al.   MOLECULAR ECOLOGY

Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations

(2013) Stéphane De Mita et al.   MOLECULAR ECOLOGY

Stacks: an analysis tool set for population genomics

(2013) Julian Catchen et al.   MOLECULAR ECOLOGY

Will plant movements keep up with climate change?

(2013) Richard T. Corlett et al.   TRENDS IN ECOLOGY & EVOLUTION

Translating conservation genetics into management: Pan-European minimum requirements for dynamic conservation units of forest tree genetic diversity

(2012) Jarkko Koskela et al.   BIOLOGICAL CONSERVATION

Which provenance and where? Seed sourcing strategies for revegetation in a changing environment

(2012) Martin F. Breed et al.   CONSERVATION GENETICS

Impacts of climate change on the future of biodiversity

(2012) Céline Bellard et al.   ECOLOGY LETTERS

Local Adaptation in the Flowering-Time Gene Network of Balsam Poplar, Populus balsamifera L.

(2012) S. R. Keller et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome sequence of dwarf birch (Betula nana) and cross-species RAD markers

(2012) Nian Wang et al.   MOLECULAR ECOLOGY

The adaptive potential ofPopulus balsamiferaL. to phenology requirements in a warmer global climate

(2012) Matthew S. Olson et al.   MOLECULAR ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Predicting the Probability of Outbreeding Depression

(2011) RICHARD FRANKHAM et al.   CONSERVATION BIOLOGY

Failure to migrate: lack of tree range expansion in response to climate change

(2011) Kai Zhu et al.   GLOBAL CHANGE BIOLOGY

Climate, competition and connectivity affect future migration and ranges of European trees

(2011) Eliane S. Meier et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

The Community Climate System Model Version 4

(2011) Peter R. Gent et al.   JOURNAL OF CLIMATE

Adaptation to marginal habitats by evolution of increased phenotypic plasticity

(2011) L.-M. CHEVIN et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Investing in evolutionary history: implementing a phylogenetic approach for mammal conservation

(2011) B. Collen et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Using Environmental Correlations to Identify Loci Underlying Local Adaptation

(2010) G. Coop et al.   GENETICS

21st century climate change threatens mountain flora unequally across Europe

(2010) ROBIN ENGLER et al.   GLOBAL CHANGE BIOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Plant phenotypic plasticity in a changing climate

(2010) A.B. Nicotra et al.   TRENDS IN PLANT SCIENCE

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

(2009) Jane Elith et al.   Annual Review of Ecology Evolution and Systematics

The velocity of climate change

(2009) Scott R. Loarie et al.   NATURE

Adaptation, migration or extirpation: climate change outcomes for tree populations

(2008) Sally N. Aitken et al.   Evolutionary Applications

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

A Meta-Analysis of Local Adaptation in Plants

(2008) Roosa Leimu et al.   PLoS One

Towards an Integrated Framework for Assessing the Vulnerability of Species to Climate Change

(2008) Stephen E Williams et al.   PLOS BIOLOGY