Development of omics‐based protocols for the microbiological characterization of multi‐strain formulations marketed as probiotics: the case of VSL#3

Compositional assessment of bacterial communities in probiotic supplements by means of metagenomic techniques

(2019) Gabriele Andrea Lugli et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Improving End-User Trust in the Quality of Commercial Probiotic Products

(2019) Scott A. Jackson et al.   Frontiers in Microbiology

Flow cytometry: a versatile technology for specific quantification and viability assessment of micro-organisms in multistrain probiotic products

(2018) C. Chiron et al.   JOURNAL OF APPLIED MICROBIOLOGY

Comparative genomic analysis of the multispecies probiotic-marketed product VSL#3

(2018) François P. Douillard et al.   PLoS One

Flow cytometry as a potential method of measuring bacterial viability in probiotic products: A review

(2018) Martin G. Wilkinson   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Engineering Components of the Lactobacillus S-Layer for Biotherapeutic Applications

(2018) Courtney Klotz et al.   Frontiers in Microbiology

Streptococcus thermophilus urease activity boosts Lactobacillus delbrueckii subsp. bulgaricus homolactic fermentation

(2017) Stefania Arioli et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Commercial Probiotic Products

(2017) Sanja Kolaček et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

An Inducible Operon Is Involved in Inulin Utilization in Lactobacillus plantarum Strains, as Revealed by Comparative Proteogenomics and Metabolic Profiling

(2016) Nirunya Buntin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbiological and molecular characterization of commercially available probiotics containing Bacillus clausii from India and Pakistan

(2016) Vania Patrone et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

Paraprobiotics: Evidences on their ability to modify biological responses, inactivation methods and perspectives on their application in foods

(2016) Caroline N. de Almada et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY

Genotyping by PCR and High-Throughput Sequencing of Commercial Probiotic Products Reveals Composition Biases

(2016) Wesley Morovic et al.   Frontiers in Microbiology

Faecal Metaproteomic Analysis Reveals a Personalized and Stable Functional Microbiome and Limited Effects of a Probiotic Intervention in Adults

(2016) Carolin A. Kolmeder et al.   PLoS One

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Proteomics Quality Control: Quality Control Software for MaxQuant Results

(2015) Chris Bielow et al.   JOURNAL OF PROTEOME RESEARCH

Colonic metaproteomic signatures of active bacteria and the host in obesity

(2015) Carolin A. Kolmeder et al.   PROTEOMICS

Effects of genetic, processing, or product formulation changes on efficacy and safety of probiotics

(2014) Mary Ellen Sanders et al.   Annals of the New York Academy of Sciences

Lactobacillus reuteri 100-23 Modulates Urea Hydrolysis in the Murine Stomach

(2014) Charlotte M. Wilson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization oftetA-like gene encoding for a major facilitator superfamily efflux pump inStreptococcus thermophilus

(2014) Stefania Arioli et al.   FEMS MICROBIOLOGY LETTERS

Microbiological Evaluation of Commercial Probiotic Products Available in the USA in 2009

(2014) L. Drago et al.   JOURNAL OF CHEMOTHERAPY

Enumeration of probiotic strains: Review of culture-dependent and alternative techniques to quantify viable bacteria

(2014) Catherine Davis   JOURNAL OF MICROBIOLOGICAL METHODS

The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic

(2014) Colin Hill et al.   Nature Reviews Gastroenterology & Hepatology

Bet-hedging during bacterial diauxic shift

(2014) A. Solopova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Urease in Health and Disease

(2014) Diego Mora et al.   PLoS Pathogens

The Comprehensive Antibiotic Resistance Database

(2013) Andrew G. McArthur et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Comparative Genomics of Bifidobacterium animalis subsp. lactis Reveals a Strict Monophyletic Bifidobacterial Taxon

(2013) C. Milani et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genetic and Physiological Responses of Bifidobacterium animalis subsp. lactis to Hydrogen Peroxide Stress

(2013) T. S. Oberg et al.   JOURNAL OF BACTERIOLOGY

Metaproteomics of our microbiome — Developing insight in function and activity in man and model systems

(2013) Carolin A. Kolmeder et al.   Journal of Proteomics

S-Layer Protein Mediates the Stimulatory Effect of Lactobacillus helveticus MIMLh5 on Innate Immunity

(2012) Valentina Taverniti et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Environmental factors influencing the efficacy of probiotic bacteria

(2012) Maria L Marco et al.   CURRENT OPINION IN BIOTECHNOLOGY

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

The immunomodulatory properties of probiotic microorganisms beyond their viability (ghost probiotics: proposal of paraprobiotic concept)

(2011) Valentina Taverniti et al.   Genes and Nutrition

Intrinsic and inducible resistance to hydrogen peroxide in Bifidobacterium species

(2011) T. S. Oberg et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Systems biology of lactic acid bacteria: a critical review

(2011) Bas Teusink et al.   Microbial Cell Factories

Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor

(2011) M. O'Connell Motherway et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Basis of Tetracycline Resistance in Bifidobacterium animalis subsp. lactis

(2010) M. Gueimonde et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Broad Conservation of Milk Utilization Genes in Bifidobacterium longum subsp. infantis as Revealed by Comparative Genomic Hybridization

(2010) R. G. LoCascio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complete Genome Sequence of Bifidobacterium animalis subsp. lactis BB-12, a Widely Consumed Probiotic Strain

(2010) C. Garrigues et al.   JOURNAL OF BACTERIOLOGY

Quantification of live and dead probiotic bacteria in lyophilised product by real-time PCR and by flow cytometry

(2009) Mateja Kramer et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein

(2009) M. Kankainen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Preliminary investigations of the colonisation of upper respiratory tract tissues of infants using a paediatric formulation of the oral probiotic Streptococcus salivarius K12

(2008) D. A. Power et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions

(2008) S. R. Konstantinov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA