Sex-specific transcriptomic responses to changes in the nutritional environment

The now and then of gut-brain signaling

(2018) Melanie M. Kaelberer et al.   BRAIN RESEARCH

Dietary choices are influenced by genotype, mating status, and sex in Drosophila melanogaster

(2018) M. Florencia Camus et al.   Ecology and Evolution

A gut-brain neural circuit for nutrient sensory transduction

(2018) Melanie Maya Kaelberer et al.   SCIENCE

Reconciling nutritional geometry with classical dietary restriction: Effects of nutrient intake, not calories, on survival and reproduction

(2018) Joshua P. Moatt et al.   AGING CELL

Perturbation of IIS/TOR signaling alters the landscape of sex-differential gene expression in Drosophila

(2018) Rita M. Graze et al.   BMC GENOMICS

Interactions between the sexual identity of the nervous system and the social environment mediate lifespan in Drosophila melanogaster

(2018) Ewan O. Flintham et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

SCENIC: single-cell regulatory network inference and clustering

(2017) Sara Aibar et al.   NATURE METHODS

Sex and genotype effects on nutrient-dependent fitness landscapes in Drosophila melanogaster

(2017) M. Florencia Camus et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Drosophila FIT is a protein-specific satiety hormone essential for feeding control

(2017) Jinghan Sun et al.   Nature Communications

Comprehensive Characterization of the Complex lola Locus Reveals a Novel Role in the Octopaminergic Pathway via Tyramine Beta-Hydroxylase Regulation

(2017) Nadja Dinges et al.   Cell Reports

Amino acid modulation of lifespan and reproduction in Drosophila

(2017) Katja M Hoedjes et al.   Current Opinion in Insect Science

Drosophila as a model for ageing

(2017) Matthew D.W. Piper et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Rapid evolution of the intersexual genetic correlation for fitness inDrosophila melanogaster

(2016) Julie M. Collet et al.   EVOLUTION

Tissue-specific down-regulation of S-adenosyl-homocysteine via suppression of dAhcyL1/dAhcyL2 extends health span and life span inDrosophila

(2016) Andrey A. Parkhitko et al.   GENES & DEVELOPMENT

Drosophilafemales trade off good nutrition with high-quality oviposition sites when choosing foods

(2016) Mathieu Lihoreau et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Whole-animal genome-wide RNAi screen identifies networks regulating male germline stem cells in Drosophila

(2016) Ying Liu et al.   Nature Communications

Internal states drive nutrient homeostasis by modulating exploration-exploitation trade-off

(2016) Verónica María Corrales-Carvajal et al.   eLife

Sex difference in pathology of the ageing gut mediates the greater response of female lifespan to dietary restriction

(2016) Jennifer C Regan et al.   eLife

Target of rapamycin signalling mediates the lifespan-extending effects of dietary restriction by essential amino acid alteration

(2016) Sahar Emran et al.   Aging-US

Sex-specific effects of protein and carbohydrate intake on reproduction but not lifespan inDrosophila melanogaster

(2015) Kim Jensen et al.   AGING CELL

Insulin/IGF signaling in Drosophila and other insects: factors that regulate production, release and post-release action of the insulin-like peptides

(2015) Dick R. Nässel et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

REPTOR and REPTOR-BP Regulate Organismal Metabolism and Transcription Downstream of TORC1

(2015) Marcel Tiebe et al.   DEVELOPMENTAL CELL

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

QuantiFly: Robust Trainable Software for Automated Drosophila Egg Counting

(2015) Dominic Waithe et al.   PLoS One

Protein and carbohydrate intake influence sperm number and fertility in male cockroaches, but not sperm viability

(2015) H. Bunning et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The Ratio of Macronutrients, Not Caloric Intake, Dictates Cardiometabolic Health, Aging, and Longevity in Ad Libitum-Fed Mice

(2014) Samantha M. Solon-Biet et al.   Cell Metabolism

Dietary live yeast alters metabolic profiles, protein biosynthesis and thermal stress tolerance of Drosophila melanogaster

(2014) Hervé Colinet et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Transcriptional response to dietary restriction in Drosophila melanogaster

(2014) Feifei Ding et al.   JOURNAL OF INSECT PHYSIOLOGY

Sex-Specific Fitness Consequences of Nutrient Intake and the Evolvability of Diet Preferences

(2013) Adam J. Reddiex et al.   AMERICAN NATURALIST

Amino acid sensing in dietary-restriction-mediated longevity: roles of signal-transducing kinases GCN2 and TOR

(2013) Jordan Gallinetti et al.   BIOCHEMICAL JOURNAL

Female-biased dimorphism underlies a female-specific role for post-embryonic Ilp7 neurons in Drosophila fertility

(2013) M. C. Castellanos et al.   DEVELOPMENT

Nutritional regulation of stem and progenitor cells in Drosophila

(2013) J. Shim et al.   DEVELOPMENT

Aging Differently: Diet- and Sex-Dependent Late-Life Mortality Patterns in Drosophila melanogaster

(2013) F. Zajitschek et al.   JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES

A holidic medium for Drosophila melanogaster

(2013) Matthew D W Piper et al.   NATURE METHODS

Interactive effects of sex, social environment, dietary restriction, and methionine on survival and reproduction in fruit flies

(2012) Felix Zajitschek et al.   AGE

The nature of nutrition: a unifying framework

(2012) Stephen J. Simpson et al.   AUSTRALIAN JOURNAL OF ZOOLOGY

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Experimental Evidence for Nutrition Regulated Stress Resistance in Drosophila ananassae

(2012) Seema Sisodia et al.   PLoS One

Partitioning sexual selection into its mating success and fertilization success components

(2012) A. Pischedda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

dFOXO-independent effects of reduced insulin-like signaling inDrosophila

(2011) Cathy Slack et al.   AGING CELL

Death and dessert: nutrient signalling pathways and ageing

(2011) Nazif Alic et al.   CURRENT OPINION IN CELL BIOLOGY

Mating alters gene expression patterns in Drosophila melanogaster male heads

(2010) Lisa L Ellis et al.   BMC GENOMICS

Mechanisms of Life Span Extension by Rapamycin in the Fruit Fly Drosophila melanogaster

(2010) Ivana Bjedov et al.   Cell Metabolism

Sex Peptide Receptor and Neuronal TOR/S6K Signaling Modulate Nutrient Balancing in Drosophila

(2010) Carlos Ribeiro et al.   CURRENT BIOLOGY

Sex differences in nutrient-dependent reproductive ageing

(2009) Alexei A. Maklakov et al.   AGING CELL

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Characteristics of genes up-regulated and down-regulated after 24 h starvation in the head of Drosophila

(2009) Kazuyo Fujikawa et al.   GENE

Amino-acid imbalance explains extension of lifespan by dietary restriction in Drosophila

(2009) Richard C. Grandison et al.   NATURE

The Insulin-Regulated CREB Coactivator TORC Promotes Stress Resistance in Drosophila

(2008) Biao Wang et al.   Cell Metabolism

Sex-Specific Fitness Effects of Nutrient Intake on Reproduction and Lifespan

(2008) Alexei A. Maklakov et al.   CURRENT BIOLOGY

Lifespan and reproduction in Drosophila: New insights from nutritional geometry

(2008) K. P. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Drosophila Egg-Laying Site Selection as a System to Study Simple Decision-Making Processes

(2008) C.-h. Yang et al.   SCIENCE