N6-methyladenosine RNA modification–mediated cellular metabolism rewiring inhibits viral replication

An evolutionary perspective on immunometabolism

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Itaconate is an anti-inflammatory metabolite that activates Nrf2 via alkylation of KEAP1

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m6A modification controls the innate immune response to infection by targeting type I interferons

(2018) Roni Winkler et al.   NATURE IMMUNOLOGY

Evolution of transcript modification by N 6 -methyladenosine in primates

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The methyltransferase NSD3 promotes antiviral innate immunity via direct lysine methylation of IRF3

(2017) Chunmei Wang et al.   JOURNAL OF EXPERIMENTAL MEDICINE

m6A mRNA methylation controls T cell homeostasis by targeting the IL-7/STAT5/SOCS pathways

(2017) Hua-Bing Li et al.   NATURE

PIK3CAmutant tumors depend on oxoglutarate dehydrogenase

(2017) Nina Ilic et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An interferon-independent lncRNA promotes viral replication by modulating cellular metabolism

(2017) Pin Wang et al.   SCIENCE

Dynamics of Human and Viral RNA Methylation during Zika Virus Infection

(2016) Gianluigi Lichinchi et al.   Cell Host & Microbe

Itaconate Links Inhibition of Succinate Dehydrogenase with Macrophage Metabolic Remodeling and Regulation of Inflammation

(2016) Vicky Lampropoulou et al.   Cell Metabolism

irCLIP platform for efficient characterization of protein–RNA interactions

(2016) Brian J Zarnegar et al.   NATURE METHODS

Metabolic crosstalk between host and pathogen: sensing, adapting and competing

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StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

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HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Adenovirus E4ORF1-Induced MYC Activation Promotes Host Cell Anabolic Glucose Metabolism and Virus Replication

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Structure of human RNA N6-methyladenine demethylase ALKBH5 provides insights into its mechanisms of nucleic acid recognition and demethylation

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N6-methyladenosine-dependent regulation of messenger RNA stability

(2013) Xiao Wang et al.   NATURE

Transcriptome-wide mapping of N6-methyladenosine by m6A-seq based on immunocapturing and massively parallel sequencing

(2013) Dan Dominissini et al.   Nature Protocols

Early Host Responses of Seasonal and Pandemic Influenza A Viruses in Primary Well-Differentiated Human Lung Epithelial Cells

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ALKBH5 Is a Mammalian RNA Demethylase that Impacts RNA Metabolism and Mouse Fertility

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Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

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edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

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