Differential contribution of steady‐state RNA and active transcription in chromatin organization
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Title
Differential contribution of steady‐state
RNA
and active transcription in chromatin organization
Authors
Keywords
-
Journal
EMBO REPORTS
Volume -, Issue -, Pages -
Publisher
EMBO
Online
2019-08-26
DOI
10.15252/embr.201948068
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Note: Only part of the references are listed.- RNA: Nuclear Glue for Folding the Genome
- (2019) Ryu-Suke Nozawa et al. TRENDS IN CELL BIOLOGY
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- (2018) Philipp G. Maass et al. MOLECULAR CELL
- Chromatin organization by an interplay of loop extrusion and compartmental segregation
- (2018) Johannes Nuebler et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcription-coupled changes in nuclear mobility of mammalian cis-regulatory elements
- (2018) Bo Gu et al. SCIENCE
- A pathway for mitotic chromosome formation
- (2018) Johan H. Gibcus et al. SCIENCE
- A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus
- (2018) A. Rasim Barutcu et al. Nature Communications
- The Energetics and Physiological Impact of Cohesin Extrusion
- (2018) Laura Vian et al. CELL
- Transcription Elongation Can Affect Genome 3D Structure
- (2018) Sven Heinz et al. CELL
- Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler
- (2018) Yu Chen et al. JOURNAL OF CELL BIOLOGY
- Interchromosomal interactions: A genomic love story of kissing chromosomes
- (2018) Philipp G. Maass et al. JOURNAL OF CELL BIOLOGY
- The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes
- (2017) Hui Fan et al. GENOME RESEARCH
- Hi-C 2.0: An optimized Hi-C procedure for high-resolution genome-wide mapping of chromosome conformation
- (2017) Houda Belaghzal et al. METHODS
- Evolutionarily Conserved Principles Predict 3D Chromatin Organization
- (2017) M. Jordan Rowley et al. MOLECULAR CELL
- Bladder Cancer: 4 Big questions
- (2017) Chris Berdik NATURE
- cis -Acting Complex-Trait-Associated lincRNA Expression Correlates with Modulation of Chromosomal Architecture
- (2017) Jennifer Yihong Tan et al. Cell Reports
- Glucocorticoid Receptor Binding Induces Rapid and Prolonged Large-Scale Chromatin Decompaction at Multiple Target Loci
- (2017) Alasdair W. Jubb et al. Cell Reports
- The connection between BRG1, CTCF and topoisomerases at TAD boundaries
- (2017) A. Rasim Barutcu et al. Nucleus
- The connection between BRG1, CTCF and topoisomerases at TAD boundaries
- (2017) A. Rasim Barutcu et al. Nucleus
- Transcription rate and transcript length drive formation of chromosomal interaction domain boundaries
- (2016) Tung BK Le et al. EMBO JOURNAL
- SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells
- (2016) A. Rasim Barutcu et al. GENOME RESEARCH
- The Sam68 nuclear body is composed of two RNase-sensitive substructures joined by the adaptor HNRNPL
- (2016) Taro Mannen et al. JOURNAL OF CELL BIOLOGY
- “Cat’s Cradling” the 3D Genome by the Act of LncRNA Transcription
- (2016) Marta Melé et al. MOLECULAR CELL
- Mapping the 3D genome: Aiming for consilience
- (2016) Job Dekker NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Principles and Properties of Stress Granules
- (2016) David S.W. Protter et al. TRENDS IN CELL BIOLOGY
- Formation of Chromosomal Domains by Loop Extrusion
- (2016) Geoffrey Fudenberg et al. Cell Reports
- Compaction and segregation of sister chromatids via active loop extrusion
- (2016) Anton Goloborodko et al. eLife
- Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments
- (2016) Neva C. Durand et al. Cell Systems
- Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing
- (2015) Li Li et al. MOLECULAR CELL
- Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins
- (2015) Yuan Lin et al. MOLECULAR CELL
- Chromatin architecture reorganization during stem cell differentiation
- (2015) Jesse R. Dixon et al. NATURE
- Condensin-driven remodelling of X chromosome topology during dosage compensation
- (2015) Emily Crane et al. NATURE
- RNA–RNA interactions in gene regulation: the coding and noncoding players
- (2015) Sonia Guil et al. TRENDS IN BIOCHEMICAL SCIENCES
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- Rate of elongation by RNA polymerase II is associated with specific gene features and epigenetic modifications
- (2014) A. Veloso et al. GENOME RESEARCH
- Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre
- (2014) Ezgi Hacisuleyman et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The PPARγ Locus Makes Long-Range Chromatin Interactions with Selected Tissue-Specific Gene Loci during Adipocyte Differentiation in a Protein Kinase A Dependent Manner
- (2014) Scott E. LeBlanc et al. PLoS One
- Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells
- (2014) Pierre Therizols et al. SCIENCE
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- (2014) J. Rinn et al. SCIENCE
- Long non-coding RNAs: modulators of nuclear structure and function
- (2013) Jan H Bergmann et al. CURRENT OPINION IN CELL BIOLOGY
- Organization of the Mitotic Chromosome
- (2013) N. Naumova et al. SCIENCE
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- (2012) R. P. McCord et al. GENOME RESEARCH
- A misplaced lncRNA causes brachydactyly in humans
- (2012) Philipp G. Maass et al. JOURNAL OF CLINICAL INVESTIGATION
- Hi–C: A comprehensive technique to capture the conformation of genomes
- (2012) Jon-Matthew Belton et al. METHODS
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- (2012) Jesse R. Dixon et al. NATURE
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- Coding RNAs with a non-coding function: Maintenance of open chromatin structure
- (2011) Maïwen Caudron-Herger et al. Nucleus
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- (2010) Argyris Papantonis et al. CURRENT OPINION IN CELL BIOLOGY
- Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
- (2010) T. Ryba et al. GENOME RESEARCH
- Nuclear Speckles
- (2010) D. L. Spector et al. Cold Spring Harbor Perspectives in Biology
- Paraspeckles
- (2010) A. H. Fox et al. Cold Spring Harbor Perspectives in Biology
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
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