The control of gene expression and cell identity by H3K9 trimethylation
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The control of gene expression and cell identity by H3K9 trimethylation
Authors
Keywords
-
Journal
DEVELOPMENT
Volume 146, Issue 19, Pages dev181180
Publisher
The Company of Biologists
Online
2019-09-20
DOI
10.1242/dev.181180
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification
- (2019) Dario Nicetto et al. SCIENCE
- Functional evaluation of transposable elements as enhancers in mouse embryonic and trophoblast stem cells
- (2019) Christopher D Todd et al. eLife
- SETDB1-dependent heterochromatin stimulates alternative lengthening of telomeres
- (2019) Mathilde Gauchier et al. Science Advances
- L(3)mbt and the LINT complex safeguard cellular identity in theDrosophilaovary
- (2018) Rémi-Xavier Coux et al. DEVELOPMENT
- A CRISPR knockout screen identifies SETDB1-target retroelement silencing factors in embryonic stem cells
- (2018) Kei Fukuda et al. GENOME RESEARCH
- Structural Basis of Heterochromatin Formation by Human HP1
- (2018) Shinichi Machida et al. MOLECULAR CELL
- Reprogramming of H3K9me3-dependent heterochromatin during mammalian embryo development
- (2018) Chenfei Wang et al. NATURE CELL BIOLOGY
- A somatic role for the histone methyltransferase Setdb1 in endogenous retrovirus silencing
- (2018) Masaki Kato et al. Nature Communications
- MGA, L3MBTL2 and E2F6 determine genomic binding of the non-canonical Polycomb repressive complex PRC1.6
- (2018) Bastian Stielow et al. PLoS Genetics
- Heterochromatin: Guardian of the Genome
- (2018) Aniek Janssen et al. Annual Review of Cell and Developmental Biology
- SUMO Safeguards Somatic and Pluripotent Cell Identities by Enforcing Distinct Chromatin States
- (2018) Jack-Christophe Cossec et al. Cell Stem Cell
- SETDB1 is essential for mouse primordial germ cell fate determination by ensuring BMP signaling
- (2018) Kentaro Mochizuki et al. DEVELOPMENT
- DNMTs and SETDB1 function as co-repressors in MAX-mediated repression of germ cell–related genes in mouse embryonic stem cells
- (2018) Daiki Tatsumi et al. PLoS One
- The H3K9 methyltransferase SETDB1 maintains female identity in Drosophila germ cells
- (2018) Anne E. Smolko et al. Nature Communications
- Piwi Is Required during Drosophila Embryogenesis to License Dual-Strand piRNA Clusters for Transposon Repression in Adult Ovaries
- (2017) Abdou Akkouche et al. MOLECULAR CELL
- Genomic and Proteomic Resolution of Heterochromatin and Its Restriction of Alternate Fate Genes
- (2017) Justin S. Becker et al. MOLECULAR CELL
- A heterochromatin-dependent transcription machinery drives piRNA expression
- (2017) Peter Refsing Andersen et al. NATURE
- KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks
- (2017) Michaël Imbeault et al. NATURE
- The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain
- (2017) Yan Jiang et al. NATURE GENETICS
- Ten principles of heterochromatin formation and function
- (2017) Robin C. Allshire et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- PCGF6-PRC1 suppresses premature differentiation of mouse embryonic stem cells by regulating germ cell-related genes
- (2017) Mitsuhiro Endoh et al. eLife
- The methyltransferaseSetdb1is essential for meiosis and mitosis in mouse oocytes and early embryos
- (2016) Angeline Eymery et al. DEVELOPMENT
- Transposable Elements and Their KRAB-ZFP Controllers Regulate Gene Expression in Adult Tissues
- (2016) Gabriela Ecco et al. DEVELOPMENTAL CELL
- Cutoff Suppresses RNA Polymerase II Termination to Ensure Expression of piRNA Precursors
- (2016) Yung-Chia Ariel Chen et al. MOLECULAR CELL
- The landscape of accessible chromatin in mammalian preimplantation embryos
- (2016) Jingyi Wu et al. NATURE
- Regulatory activities of transposable elements: from conflicts to benefits
- (2016) Edward B. Chuong et al. NATURE REVIEWS GENETICS
- The molecular hallmarks of epigenetic control
- (2016) C. David Allis et al. NATURE REVIEWS GENETICS
- H3K9me3-Dependent Heterochromatin: Barrier to Cell Fate Changes
- (2016) Justin S. Becker et al. TRENDS IN GENETICS
- Dynamic and flexible H3K9me3 bridging via HP1β dimerization establishes a plastic state of condensed chromatin
- (2016) Kyoko Hiragami-Hamada et al. Nature Communications
- Maternal Setdb1 Is Required for Meiotic Progression and Preimplantation Development in Mouse
- (2016) Jeesun Kim et al. PLoS Genetics
- A Serial shRNA Screen for Roadblocks to Reprogramming Identifies the Protein Modifier SUMO2
- (2016) Marti Borkent et al. Stem Cell Reports
- Systematic Identification of Factors for Provirus Silencing in Embryonic Stem Cells
- (2015) Bin Xia Yang et al. CELL
- The KRAB zinc finger protein ZFP809 is required to initiate epigenetic silencing of endogenous retroviruses
- (2015) Gernot Wolf et al. GENES & DEVELOPMENT
- Silencio/CG9754 connects the Piwi–piRNA complex to the cellular heterochromatin machinery
- (2015) Grzegorz Sienski et al. GENES & DEVELOPMENT
- Chromatin Landscape Defined by Repressive Histone Methylation during Oligodendrocyte Differentiation
- (2015) J. Liu et al. JOURNAL OF NEUROSCIENCE
- H3K4/H3K9me3 Bivalent Chromatin Domains Targeted by Lineage-Specific DNA Methylation Pauses Adipocyte Differentiation
- (2015) Yoshihiro Matsumura et al. MOLECULAR CELL
- The histone chaperone CAF-1 safeguards somatic cell identity
- (2015) Sihem Cheloufi et al. NATURE
- RNA-mediated epigenetic regulation of gene expression
- (2015) Daniel Holoch et al. NATURE REVIEWS GENETICS
- Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly
- (2015) Takashi Ishiuchi et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The histone methyltransferase SETDB1 represses endogenous and exogenous retroviruses in B lymphocytes
- (2015) Patrick L. Collins et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Panoramix enforces piRNA-dependent cotranscriptional silencing
- (2015) Y. Yu et al. SCIENCE
- Early embryonic-like cells are induced by downregulating replication-dependent chromatin assembly
- (2015) Takashi Ishiuchi et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- TRIM28 Represses Transcription of Endogenous Retroviruses in Neural Progenitor Cells
- (2015) Liana Fasching et al. Cell Reports
- Rapid epigenetic adaptation to uncontrolled heterochromatin spreading
- (2015) Jiyong Wang et al. eLife
- Spotting the enemy within: Targeted silencing of foreign DNA in mammalian genomes by the Krüppel-associated box zinc finger protein family
- (2015) Gernot Wolf et al. Mobile DNA
- The Rhino-Deadlock-Cutoff Complex Licenses Noncanonical Transcription of Dual-Strand piRNA Clusters in Drosophila
- (2014) Fabio Mohn et al. CELL
- Embryonic Development following Somatic Cell Nuclear Transfer Impeded by Persisting Histone Methylation
- (2014) Shogo Matoba et al. CELL
- Epigenetic regulation of oogenesis and germ stem cell maintenance by the Drosophila histone methyltransferase Eggless/dSetDB1
- (2014) Emily Clough et al. DEVELOPMENTAL BIOLOGY
- Setdb1is required for germline development and silencing of H3K9me3-marked endogenous retroviruses in primordial germ cells
- (2014) Sheng Liu et al. GENES & DEVELOPMENT
- piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells
- (2014) D. Pezic et al. GENES & DEVELOPMENT
- Epigenetic inheritance uncoupled from sequence-specific recruitment
- (2014) K. Ragunathan et al. SCIENCE
- KRAB-Zinc Finger Proteins: A Repressor Family Displaying Multiple Biological Functions
- (2013) Angelo Lupo et al. CURRENT GENOMICS
- Polycomb complexes in stem cells and embryonic development
- (2013) L. Aloia et al. DEVELOPMENT
- SUMO: A Multifaceted Modifier of Chromatin Structure and Function
- (2013) Caelin Cubeñas-Potts et al. DEVELOPMENTAL CELL
- Multiple roles for Piwi in silencing Drosophila transposons
- (2013) N. V. Rozhkov et al. GENES & DEVELOPMENT
- Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state
- (2013) A. Le Thomas et al. GENES & DEVELOPMENT
- A Genome-wide RNAi Screen Draws a Genetic Framework for Transposon Control and Primary piRNA Biogenesis in Drosophila
- (2013) Felix Muerdter et al. MOLECULAR CELL
- Proteomic and genomic approaches reveal critical functions of H3K9 methylation and heterochromatin protein-1γ in reprogramming to pluripotency
- (2013) Rupa Sridharan et al. NATURE CELL BIOLOGY
- Epigenetics of Ciliates
- (2013) D. L. Chalker et al. Cold Spring Harbor Perspectives in Biology
- Position-Effect Variegation, Heterochromatin Formation, and Gene Silencing in Drosophila
- (2013) S. C. R. Elgin et al. Cold Spring Harbor Perspectives in Biology
- Max is a repressor of germ cell-related gene expression in mouse embryonic stem cells
- (2013) Ikuma Maeda et al. Nature Communications
- Maternal Depletion of Piwi, a Component of the RNAi System, Impacts Heterochromatin Formation in Drosophila
- (2013) Tingting Gu et al. PLoS Genetics
- Transposable Elements Are Major Contributors to the Origin, Diversification, and Regulation of Vertebrate Long Noncoding RNAs
- (2013) Aurélie Kapusta et al. PLoS Genetics
- Transcriptional Silencing of Transposons by Piwi and Maelstrom and Its Impact on Chromatin State and Gene Expression
- (2012) Grzegorz Sienski et al. CELL
- piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans
- (2012) Alyson Ashe et al. CELL
- Facilitators and Impediments of the Pluripotency Reprogramming Factors' Initial Engagement with the Genome
- (2012) Abdenour Soufi et al. CELL
- Protein Group Modification and Synergy in the SUMO Pathway as Exemplified in DNA Repair
- (2012) Ivan Psakhye et al. CELL
- Essential roles of the histone methyltransferase ESET in the epigenetic control of neural progenitor cells during development
- (2012) S.-L. Tan et al. DEVELOPMENT
- TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells
- (2012) H. M. Rowe et al. GENOME RESEARCH
- Chromatin-modifying enzymes as modulators of reprogramming
- (2012) Tamer T. Onder et al. NATURE
- An epigenetic silencing pathway controlling T helper 2 cell lineage commitment
- (2012) Rhys S. Allan et al. NATURE
- A unique regulatory phase of DNA methylation in the early mammalian embryo
- (2012) Zachary D. Smith et al. NATURE
- H3K9 methylation is a barrier during somatic cell reprogramming into iPSCs
- (2012) Jiekai Chen et al. NATURE GENETICS
- A transcription factor–based mechanism for mouse heterochromatin formation
- (2012) Aydan Bulut-Karslioglu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Regulation of chromatin by histone modifications
- (2011) Andrew J Bannister et al. CELL RESEARCH
- DNA Methylation and SETDB1/H3K9me3 Regulate Predominantly Distinct Sets of Genes, Retroelements, and Chimeric Transcripts in mESCs
- (2011) Mohammad M. Karimi et al. Cell Stem Cell
- piRNA Production Requires Heterochromatin Formation in Drosophila
- (2011) Prashanth Rangan et al. CURRENT BIOLOGY
- Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly
- (2011) Daniele Canzio et al. MOLECULAR CELL
- SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatin
- (2011) Christèle Maison et al. NATURE GENETICS
- Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line
- (2011) S. H. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Separation of stem cell maintenance and transposon silencing functions of Piwi protein
- (2011) M. S. Klenov et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Retrotransposon-Induced Heterochromatin Spreading in the Mouse Revealed by Insertional Polymorphisms
- (2011) Rita Rebollo et al. PLoS Genetics
- Stepwise Histone Replacement by SWR1 Requires Dual Activation with Histone H2A.Z and Canonical Nucleosome
- (2010) Ed Luk et al. CELL
- Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin
- (2010) N. C. Riddle et al. GENOME RESEARCH
- KAP1 controls endogenous retroviruses in embryonic stem cells
- (2010) Helen M. Rowe et al. NATURE
- Proviral silencing in embryonic stem cells requires the histone methyltransferase ESET
- (2010) Toshiyuki Matsui et al. NATURE
- Transposable elements have rewired the core regulatory network of human embryonic stem cells
- (2010) Galih Kunarso et al. NATURE GENETICS
- ZNF274 Recruits the Histone Methyltransferase SETDB1 to the 3′ Ends of ZNF Genes
- (2010) Seth Frietze et al. PLoS One
- Small RNA-based silencing strategies for transposons in the process of invading Drosophila species
- (2010) N. V. Rozhkov et al. RNA
- Multiple Roles for Heterochromatin Protein 1 Genes in Drosophila
- (2009) Danielle Vermaak et al. Annual Review of Genetics
- Developmental roles of the histone lysine demethylases
- (2009) A. Nottke et al. DEVELOPMENT
- SetDB1 contributes to repression of genes encoding developmental regulators and maintenance of ES cell state
- (2009) S. Bilodeau et al. GENES & DEVELOPMENT
- Eset partners with Oct4 to restrict extraembryonic trophoblast lineage potential in embryonic stem cells
- (2009) P. Yuan et al. GENES & DEVELOPMENT
- Multiple SET Methyltransferases Are Required to Maintain Normal Heterochromatin Domains in the Genome of Drosophila melanogaster
- (2009) B. Brower-Toland et al. GENETICS
- The regulated retrotransposon transcriptome of mammalian cells
- (2009) Geoffrey J Faulkner et al. NATURE GENETICS
- Linking DNA methylation and histone modification: patterns and paradigms
- (2009) Howard Cedar et al. NATURE REVIEWS GENETICS
- ERG-associated protein with SET domain (ESET)-Oct4 interaction regulates pluripotency and represses the trophectoderm lineage
- (2009) Leng-Siew Yeap et al. Epigenetics & Chromatin
- SUMO-modified Sp3 represses transcription by provoking local heterochromatic gene silencing
- (2008) Bastian Stielow et al. EMBO REPORTS
- Erasing the methyl mark: histone demethylases at the center of cellular differentiation and disease
- (2008) P. A.C. Cloos et al. GENES & DEVELOPMENT
- HP1-β is required for development of the cerebral neocortex and neuromuscular junctions
- (2008) Rebecca Aucott et al. JOURNAL OF CELL BIOLOGY
- A piRNA Pathway Primed by Individual Transposons Is Linked to De Novo DNA Methylation in Mice
- (2008) Alexei A. Aravin et al. MOLECULAR CELL
- Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin
- (2008) Ke Zhang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started