Identification of co-evolving temporal networks

Functional enrichment analysis of three Alzheimer's disease genome-wide association studies identities DAB1 as a novel candidate liability/protective gene

(2015) Hui Gao et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Exploring the structure and function of temporal networks with dynamic graphlets

(2015) Y. Hulovatyy et al.   BIOINFORMATICS

MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation

(2015) V. Vijayan et al.   BIOINFORMATICS

Genome-wide association study for sight-threatening diabetic retinopathy reveals association with genetic variation near the GRB2 gene

(2015) Kathryn P. Burdon et al.   DIABETOLOGIA

MAGNA: Maximizing Accuracy in Global Network Alignment

(2014) Vikram Saraph et al.   BIOINFORMATICS

Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes

(2014) Mark D M Leiserson et al.   NATURE GENETICS

Coherent feedforward transcriptional regulatory motifs enhance drug resistance

(2014) Daniel A. Charlebois et al.   PHYSICAL REVIEW E

BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks

(2013) Ferhat Alkan et al.   BIOINFORMATICS

SPINAL: scalable protein interaction network alignment

(2013) Ahmet E. Aladağ et al.   BIOINFORMATICS

NETAL: a new graph-based method for global alignment of protein–protein interaction networks

(2013) Behnam Neyshabur et al.   BIOINFORMATICS

SMETANA: Accurate and Scalable Algorithm for Probabilistic Alignment of Large-Scale Biological Networks

(2013) Sayed Mohammad Ebrahim Sahraeian et al.   PLoS One

Atrophy of myoepithelial cells in parotid glands of diabetic mice; detection using skeletal muscle actin, a novel marker

(2013) Tomoko Nashida et al.   FEBS Open Bio

PINALOG: a novel approach to align protein interaction networks—implications for complex detection and function prediction

(2012) Hang T. T. Phan et al.   BIOINFORMATICS

Global network alignment using multiscale spectral signatures

(2012) R. Patro et al.   BIOINFORMATICS

Scalable global alignment for multiple biological networks

(2012) Yu-Keng Shih et al.   BMC BIOINFORMATICS

Temporal networks

(2012) Petter Holme et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Integrative network alignment reveals large regions of global network similarity in yeast and human

(2011) Oleksii Kuchaiev et al.   BIOINFORMATICS

TOPAC: ALIGNMENT OF GENE REGULATORY NETWORKS USING TOPOLOGY-AWARE COLORING

(2011) GÜNHAN GÜLSOY et al.   Journal of Bioinformatics and Computational Biology

Toward the dynamic interactome: it's about time

(2010) T. M. Przytycka et al.   BRIEFINGS IN BIOINFORMATICS

IsoRankN: spectral methods for global alignment of multiple protein networks

(2009) C.-S. Liao et al.   BIOINFORMATICS

Human genes involved in copy number variation: mechanisms of origin, functional effects and implications for disease

(2009) A.J. de Smith et al.   CYTOGENETIC AND GENOME RESEARCH

Cause and Consequences of Genetic and Epigenetic Alterations in Human Cancer

(2008) B. Sadikovic et al.   CURRENT GENOMICS

Gene expression changes in the course of normal brain aging are sexually dimorphic

(2008) N. C. Berchtold et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional architecture of Escherichia coli: new insights provided by a natural decomposition approach

(2008) Julio A Freyre-Gonzalez et al.   GENOME BIOLOGY