Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins
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Title
Transcriptome analysis of bolting in A. tequilana reveals roles for florigen, MADS, fructans and gibberellins
Authors
Keywords
RNAseq, <em class="EmphasisTypeItalic ">A. tequilana</em>, Bolting, Flowering locus T, MADS, Fructan, Gibberellins
Journal
BMC GENOMICS
Volume 20, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-06-10
DOI
10.1186/s12864-019-5808-9
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- (2018) Hengfu Yin et al. BMC GENOMICS
- Starch accumulation is associated with active growth in A. tequilana
- (2018) Laura E. Zavala-García et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Transcriptome Comparison Reveals Distinct Selection Patterns in Domesticated and Wild Agave Species, the Important CAM Plants
- (2018) Xing Huang et al. International Journal of Genomics
- Development and use of bioenergy feedstocks for semi-arid and arid lands
- (2015) John C. Cushman et al. JOURNAL OF EXPERIMENTAL BOTANY
- A roadmap for research on crassulacean acid metabolism (CAM) to enhance sustainable food and bioenergy production in a hotter, drier world
- (2015) Xiaohan Yang et al. NEW PHYTOLOGIST
- New insights into plant glycoside hydrolase family 32 in Agave species
- (2015) Emmanuel Avila de Dios et al. Frontiers in Plant Science
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
- (2013) Stephen M Gross et al. BMC GENOMICS
- CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
- (2013) Liguo Wang et al. NUCLEIC ACIDS RESEARCH
- Genetic regulation of flowering time in annual and perennial plants
- (2013) Muhammad Rehman Gul Khan et al. Wiley Interdisciplinary Reviews-RNA
- Sugar promotes vegetative phase change in Arabidopsis thaliana by repressing the expression of MIR156A and MIR156C
- (2013) Li Yang et al. eLife
- Sugar is an endogenous cue for juvenile-to-adult phase transition in plants
- (2013) Sha Yu et al. eLife
- Phylogenomic analysis of transcriptome data elucidates co-occurrence of a paleopolyploid event and the origin of bimodal karyotypes in Agavoideae (Asparagaceae)
- (2012) Michael R. McKain et al. AMERICAN JOURNAL OF BOTANY
- Fruit load modulates flowering-related gene expression in buds of alternate-bearing ‘Moncada’ mandarin
- (2012) Natalia Muñoz-Fambuena et al. ANNALS OF BOTANY
- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
- (2012) Marcel H. Schulz et al. BIOINFORMATICS
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Fructan Metabolism in A. tequilana Weber Blue Variety along Its Developmental Cycle in the Field
- (2012) Erika Mellado-Mojica et al. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY
- Molecular and Functional Characterization of Novel Fructosyltransferases and Invertases from Agave tequilana
- (2012) Celso Cortés-Romero et al. PLoS One
- Fruit regulates seasonal expression of flowering genes in alternate-bearing ‘Moncada’ mandarin
- (2011) Natalia Muñoz-Fambuena et al. ANNALS OF BOTANY
- Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study
- (2011) Qiong-Yi Zhao et al. BMC BIOINFORMATICS
- Evolution of the PEBP Gene Family in Plants: Functional Diversification in Seed Plant Evolution
- (2011) A. Karlgren et al. PLANT PHYSIOLOGY
- REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
- (2011) Fran Supek et al. PLoS One
- FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar
- (2011) C.-Y. Hsu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Agave tequilana MADS genes show novel expression patterns in meristems, developing bulbils and floral organs
- (2011) Silvia del Carmen Delgado Sandoval et al. SEXUAL PLANT REPRODUCTION
- CD-HIT Suite: a web server for clustering and comparing biological sequences
- (2010) Ying Huang et al. BIOINFORMATICS
- A new agenda for blue agave landraces: food, energy and tequila
- (2010) ANA VALENZUELA Global Change Biology Bioenergy
- agriGO: a GO analysis toolkit for the agricultural community
- (2010) Zhou Du et al. NUCLEIC ACIDS RESEARCH
- AGAMOUS-LIKE 6 is a floral promoter that negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis
- (2010) Seung Kwan Yoo et al. PLANT JOURNAL
- An Antagonistic Pair of FT Homologs Mediates the Control of Flowering Time in Sugar Beet
- (2010) P. A. Pin et al. SCIENCE
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Donor and acceptor substrate selectivity among plant glycoside hydrolase family 32 enzymes
- (2009) Wim Van den Ende et al. FEBS Journal
- OsMADS50andOsMADS56function antagonistically in regulating long day (LD)-dependent flowering in rice
- (2009) CHOONG-HWAN RYU et al. PLANT CELL AND ENVIRONMENT
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Regulation of floral initiation in horticultural trees
- (2008) J. D. Wilkie et al. JOURNAL OF EXPERIMENTAL BOTANY
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