Viability and Composition Validation of Commercial Probiotic Products by Selective Culturing Combined with Next-Generation Sequencing

Compositional assessment of bacterial communities in probiotic supplements by means of metagenomic techniques

(2019) Gabriele Andrea Lugli et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Genotyping by PCR and High-Throughput Sequencing of Commercial Probiotic Products Reveals Composition Biases

(2016) Wesley Morovic et al.   Frontiers in Microbiology

Culture-Independent Metagenomic Surveillance of Commercially Available Probiotics with High-Throughput Next-Generation Sequencing

(2016) Jennifer N. Patro et al.   mSphere

Development and utility of the FDA ‘GutProbe’ DNA microarray for identification, genotyping and metagenomic analysis of commercially available probiotics

(2015) J.N. Patro et al.   JOURNAL OF APPLIED MICROBIOLOGY

Discovering probiotic microorganisms: in vitro, in vivo, genetic and omics approaches

(2015) Konstantinos Papadimitriou et al.   Frontiers in Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Microbiological Evaluation of Commercial Probiotic Products Available in the USA in 2009

(2014) L. Drago et al.   JOURNAL OF CHEMOTHERAPY

The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic

(2014) Colin Hill et al.   Nature Reviews Gastroenterology & Hepatology

Microbiological and genetic identification of some probiotics proposed for medical use in 2011

(2013) Marco Toscano et al.   JOURNAL OF CHEMOTHERAPY

COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly

(2012) B. Liu et al.   BIOINFORMATICS

Exploring the Diversity of the Bifidobacterial Population in the Human Intestinal Tract

(2009) F. Turroni et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

Quantitative strain-specific detection ofLactobacillus rhamnosusGG in human faecal samples by real-time PCR

(2009) T. Ahlroos et al.   JOURNAL OF APPLIED MICROBIOLOGY

The Pervasive Effects of an Antibiotic on the Human Gut Microbiota, as Revealed by Deep 16S rRNA Sequencing

(2008) Les Dethlefsen et al.   PLOS BIOLOGY

Short read fragment assembly of bacterial genomes

(2007) M. J. Chaisson et al.   GENOME RESEARCH

Biosafety assessment of probiotics used for human consumption: recommendations from the EU-PROSAFE project

(2007) Vanessa Vankerckhoven et al.   TRENDS IN FOOD SCIENCE & TECHNOLOGY