Multi-omics Signature of Candida auris, an Emerging and Multidrug-Resistant Pathogen

Lipid Mini-On: Mining and ontology tool for enrichment analysis of lipidomic data

(2019) Geremy Clair et al.   BIOINFORMATICS

Understanding Echinocandin Resistance in the Emerging Pathogen Candida auris

(2018) Milena Kordalewska et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Surface disinfection challenges for Candida auris : an in-vitro study

(2018) R. Kean et al.   JOURNAL OF HOSPITAL INFECTION

Broth Microdilution In Vitro Screening: An Easy and Fast Method to Detect New Antifungal Compounds

(2018) Calliandra Maria de-Souza-Silva et al.   Jove-Journal of Visualized Experiments

Transcriptome Assembly and Profiling of Candida auris Reveals Novel Insights into Biofilm-Mediated Resistance

(2018) Ryan Kean et al.   mSphere

Limited ERG11 Mutations Identified in Isolates of Candida auris Directly Contribute to Reduced Azole Susceptibility

(2018) Kelley R. Healey et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Overexpression or Deletion of Ergosterol Biosynthesis Genes Alters Doubling Time, Response to Stress Agents, and Drug Susceptibility in Saccharomyces cerevisiae

(2018) Somanon Bhattacharya et al.   mBio

Rapid Detection of ERG11-Associated Azole Resistance and FKS-Associated Echinocandin Resistance in Candida auris

(2018) Xin Hou et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Involvement of mitochondrial aerobic respiratory activity in efflux-mediated resistance of C .  albicans to fluconazole

(2017) H. Guo et al.   JOURNAL DE MYCOLOGIE MEDICALE

Survival, Persistence, and Isolation of the Emerging Multidrug-Resistant Pathogenic Yeast Candida auris on a Plastic Health Care Surface

(2017) Rory M. Welsh et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Azole resistance in Candida albicans from animals: Highlights on efflux pump activity and gene overexpression

(2017) Marcos Fábio Gadelha Rocha et al.   MYCOSES

Lipidomics reveals dramatic lipid compositional changes in the maturing postnatal lung

(2017) Sydney E. Dautel et al.   Scientific Reports

Candida auris: A rapidly emerging cause of hospital-acquired multidrug-resistant fungal infections globally

(2017) Anuradha Chowdhary et al.   PLoS Pathogens

Current perspective on emergence, diagnosis and drug resistance in Candida auris

(2017) Smita Sarma et al.   Infection and Drug Resistance

Cell wall integrity signalling in human pathogenic fungi

(2016) Karl Dichtl et al.   CELLULAR MICROBIOLOGY

Simultaneous Emergence of Multidrug-ResistantCandida aurison 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses

(2016) Shawn R. Lockhart et al.   CLINICAL INFECTIOUS DISEASES

Evidence of genotypic diversity among Candida auris isolates by multilocus sequence typing, matrix-assisted laser desorption ionization time-of-flight mass spectrometry and amplified fragment length polymorphism

(2016) A. Prakash et al.   CLINICAL MICROBIOLOGY AND INFECTION

Can Multidrug-Resistant Candida auris Be Reliably Identified in Clinical Microbiology Laboratories?

(2016) Masako Mizusawa et al.   JOURNAL OF CLINICAL MICROBIOLOGY

First report of Candida auris in America: Clinical and microbiological aspects of 18 episodes of candidemia

(2016) Belinda Calvo et al.   JOURNAL OF INFECTION

Investigation of the First Seven Reported Cases ofCandida auris,a Globally Emerging Invasive, Multidrug-Resistant Fungus — United States, May 2013–August 2016

(2016) Snigdha Vallabhaneni et al.   MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT

Antibody Binding Alters the Characteristics and Contents of Extracellular Vesicles Released by Histoplasma capsulatum

(2016) Ludmila Matos Baltazar et al.   mSphere

MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses

(2016) Ernesto S. Nakayasu et al.   mSystems

Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for the rapid identification of yeasts causing bloodstream infections

(2015) A.K. Ghosh et al.   CLINICAL MICROBIOLOGY AND INFECTION

Mapping of functional domains and characterization of the transcription factor Cph1 that mediate morphogenesis in Candida albicans

(2015) Protiti Maiti et al.   FUNGAL GENETICS AND BIOLOGY

Cryptococcal Phospholipase B1 Is Required for Intracellular Proliferation and Control of Titan Cell Morphology during Macrophage Infection

(2015) Robert J. Evans et al.   INFECTION AND IMMUNITY

Effects of fluconazole onCandida glabratabiofilms and its relationship with ABC transporter gene expression

(2014) Elza Fonseca et al.   BIOFOULING

Multidrug-resistant endemic clonal strain of Candida auris in India

(2013) A. Chowdhary et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes

(2013) Young-Mo Kim et al.   Molecular BioSystems

Lipidomics and in Vitro Azole Resistance in Candida albicans

(2013) Ashutosh Singh et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

VANTED v2: a framework for systems biology applications

(2012) Hendrik Rohn et al.   BMC Systems Biology

A Recently Evolved Transcriptional Network Controls Biofilm Development in Candida albicans

(2012) Clarissa J. Nobile et al.   CELL

Identification and Functional Characterization of Rca1, a Transcription Factor Involved in both Antifungal Susceptibility and Host Response in Candida albicans

(2012) Patrick Vandeputte et al.   EUKARYOTIC CELL

Superoxide Dismutases Are Involved in Candida albicans Biofilm Persistence against Miconazole

(2011) Anna Bink et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

RNA-Seq analysis in MeV

(2011) E. A. Howe et al.   BIOINFORMATICS

First Three Reported Cases of Nosocomial Fungemia Caused by Candida auris

(2011) Wee Gyo Lee et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

(2010) Tomáš Pluskal et al.   BMC BIOINFORMATICS

Biofilm formation and genotyping ofCandida haemulonii, Candida pseudohaemulonii, and a proposed new species (Candida auris) isolates from Korea

(2010) Bong Joon Oh et al.   MEDICAL MYCOLOGY

MetaboliteDetector: Comprehensive Analysis Tool for Targeted and Nontargeted GC/MS Based Metabolome Analysis

(2009) Karsten Hiller et al.   ANALYTICAL CHEMISTRY

FiehnLib: Mass Spectral and Retention Index Libraries for Metabolomics Based on Quadrupole and Time-of-Flight Gas Chromatography/Mass Spectrometry

(2009) Tobias Kind et al.   ANALYTICAL CHEMISTRY

Candida aurissp. nov., a novel ascomycetous yeast isolated from the external ear canal of an inpatient in a Japanese hospital

(2009) Kazuo Satoh et al.   MICROBIOLOGY AND IMMUNOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Candida albicans biofilm formation is associated with increased anti-oxidative capacities

(2008) C. Jayampath Seneviratne et al.   PROTEOMICS