Linked within-host and between-host models and data for infectious diseases: a systematic review
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Linked within-host and between-host models and data for infectious diseases: a systematic review
Authors
Keywords
-
Journal
PeerJ
Volume 7, Issue -, Pages e7057
Publisher
PeerJ
Online
2019-06-19
DOI
10.7717/peerj.7057
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Immune system handling time may alter the outcome of competition between pathogens and the immune system
- (2018) Philip B. Greenspoon et al. JOURNAL OF THEORETICAL BIOLOGY
- Within-host dynamics and random duration of pathogen infection: Implications for between-host transmission
- (2018) Heather M. Lindberg et al. JOURNAL OF THEORETICAL BIOLOGY
- The impact of HIV-1 within-host evolution on transmission dynamics
- (2018) Kristof Theys et al. Current Opinion in Virology
- Effects of multiple sources of genetic drift on pathogen variation within hosts
- (2018) David A. Kennedy et al. PLOS BIOLOGY
- The Role of aDNA in Understanding the Coevolutionary Patterns of Human Sexually Transmitted Infections
- (2018) Ville Pimenoff et al. Genes
- Linking sex differences to the evolution of infectious disease life-histories
- (2018) Matthew D. Hall et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Mechanisms and Concepts in RNA Virus Population Dynamics and Evolution
- (2018) Patrick T. Dolan et al. Annual Review of Virology
- Modelling the evolution of HIV-1 virulence in response to imperfect therapy and prophylaxis
- (2017) David R. M. Smith et al. Evolutionary Applications
- Phylodynamic Inference across Epidemic Scales
- (2017) Erik M. Volz et al. MOLECULAR BIOLOGY AND EVOLUTION
- Host heterogeneity affects both parasite transmission to and fitness on subsequent hosts
- (2017) Jessica F. Stephenson et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Inference of Transmission Network Structure from HIV Phylogenetic Trees
- (2017) Federica Giardina et al. PLoS Computational Biology
- A complete categorization of multiscale models of infectious disease systems
- (2017) Winston Garira Journal of Biological Dynamics
- Multi-scale immunoepidemiological modeling of within-host and between-host HIV dynamics: systematic review of mathematical models
- (2017) Nargesalsadat Dorratoltaj et al. PeerJ
- Structural and Practical Identifiability Issues of Immuno-Epidemiological Vector–Host Models with Application to Rift Valley Fever
- (2016) Necibe Tuncer et al. BULLETIN OF MATHEMATICAL BIOLOGY
- Heterogeneity in pathogen transmission: mechanisms and methodology
- (2016) Kimberly L. VanderWaal et al. FUNCTIONAL ECOLOGY
- The tortoise or the hare? Impacts of within-host dynamics on transmission success of arthropod-borne viruses
- (2015) Benjamin M. Althouse et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge
- (2015) Andreas Handel et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The influence of biological rhythms on host–parasite interactions
- (2015) Micaela Martinez-Bakker et al. TRENDS IN ECOLOGY & EVOLUTION
- Eight challenges in phylodynamic inference
- (2015) Simon D.W. Frost et al. Epidemics
- A mathematical modelling framework for linked within-host and between-host dynamics for infections with free-living pathogens in the environment
- (2014) Winston Garira et al. MATHEMATICAL BIOSCIENCES
- Estimating the Delay between Host Infection and Disease (Incubation Period) and Assessing Its Significance to the Epidemiology of Plant Diseases
- (2014) Melen Leclerc et al. PLoS One
- Trade-offs between and within scales: environmental persistence and within-host fitness of avian influenza viruses
- (2014) A. Handel et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Genealogical Population Dynamics of HIV-1 in a Large Transmission Chain: Bridging within and among Host Evolutionary Rates
- (2014) Bram Vrancken et al. PLoS Computational Biology
- Immuno-epidemiological Modeling of HIV-1 Predicts High Heritability of the Set-Point Virus Load, while Selection for CTL Escape Dominates Virulence Evolution
- (2014) Christiaan H. van Dorp et al. PLoS Computational Biology
- Preferred Reporting Items for Systematic Reviews and Meta-Analyses: The PRISMA Statement
- (2013) David Moher ANNALS OF INTERNAL MEDICINE
- A systematic review of mathematical models of mosquito-borne pathogen transmission: 1970-2010
- (2013) R. C. Reiner et al. Journal of the Royal Society Interface
- Towards multiscale modeling of influenza infection
- (2013) Lisa N. Murillo et al. JOURNAL OF THEORETICAL BIOLOGY
- A Stochastic Multi-Scale Model of HIV-1 Transmission for Decision-Making: Application to a MSM Population
- (2013) Lilit Yeghiazarian et al. PLoS One
- Host and viral features of human dengue cases shape the population of infected and infectious Aedes aegypti mosquitoes
- (2013) N. M. Nguyen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Multi-scale Analysis of Influenza A Virus Fitness Trade-offs due to Temperature-dependent Virus Persistence
- (2013) Andreas Handel et al. PLoS Computational Biology
- Life in cells, hosts, and vectors: Parasite evolution across scales
- (2012) Nicole Mideo et al. INFECTION GENETICS AND EVOLUTION
- Cytotoxic T-Lymphocyte Escape Mutations Identified by HLA Association Favor Those Which Escape and Revert Rapidly
- (2012) Helen R. Fryer et al. JOURNAL OF VIROLOGY
- Investigating effects of between- and within-host variability on Escherichia coli O157 shedding pattern and transmission
- (2012) S. Chen et al. PREVENTIVE VETERINARY MEDICINE
- A review of influenza haemagglutinin receptor binding as it relates to pandemic properties
- (2012) Sam Wilks et al. VACCINE
- A modeller's perspective on infection dynamics within and between hosts
- (2012) Maite Severins VETERINARY QUARTERLY
- Nested model reveals potential amplification of an HIV epidemic due to drug resistance
- (2012) Roberto A. Saenz et al. Epidemics
- BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: THEORY
- (2011) Troy Day et al. EVOLUTION
- BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: APPLICATION
- (2011) Nicole Mideo et al. EVOLUTION
- Malaria and trypanosome transmission: different parasites, same rules?
- (2011) Laura C. Pollitt et al. TRENDS IN PARASITOLOGY
- Autonomous Targeting of Infectious Superspreaders Using Engineered Transmissible Therapies
- (2011) Vincent T. Metzger et al. PLoS Computational Biology
- Disease ecology meets ecological immunology: understanding the links between organismal immunity and infection dynamics in natural populations
- (2010) Dana M. Hawley et al. FUNCTIONAL ECOLOGY
- Within-host dynamics of Trichinella spiralis predict persistent parasite transmission in rat populations
- (2010) Katsuhisa Takumi et al. INTERNATIONAL JOURNAL FOR PARASITOLOGY
- Epidemiological and clinical consequences of within-host evolution
- (2010) Samuel Alizon et al. TRENDS IN MICROBIOLOGY
- Random, top-down, or bottom-up coexistence of parasites: malaria population dynamics in multi-parasitic settings
- (2009) Luis Fernando Chaves et al. ECOLOGY
- Acute or Chronic? Within‐Host Models with Immune Dynamics, Infection Outcome, and Parasite Evolution
- (2008) Samuel Alizon et al. AMERICAN NATURALIST
- Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases
- (2008) N MIDEO et al. TRENDS IN ECOLOGY & EVOLUTION
- Directly transmitted viral diseases: modeling the dynamics of transmission
- (2008) Jennie S. Lavine et al. TRENDS IN MICROBIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation