Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge
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Title
Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge
Authors
Keywords
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Journal
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Volume 370, Issue 1675, Pages 20140302
Publisher
The Royal Society
Online
2015-07-07
DOI
10.1098/rstb.2014.0302
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Note: Only part of the references are listed.- Oseltamivir treatment for influenza in adults: a meta-analysis of randomised controlled trials
- (2015) Joanna Dobson et al. LANCET
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- (2015) Hassan Zaraket et al. Nature Communications
- Nine challenges in incorporating the dynamics of behaviour in infectious diseases models
- (2015) Sebastian Funk et al. Epidemics
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- (2015) Andreas Handel et al. Lancet Respiratory Medicine
- A large-scale immuno-epidemiological simulation of influenza A epidemics
- (2014) Sarah Lukens et al. BMC PUBLIC HEALTH
- The impact of illness and the impact of school closure on social contact patterns.
- (2014) KTD Eames et al. HEALTH TECHNOLOGY ASSESSMENT
- How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example
- (2014) A. Handel et al. Journal of the Royal Society Interface
- Emerging disease dynamics in a model coupling within-host and between-host systems
- (2014) Xiuli Cen et al. JOURNAL OF THEORETICAL BIOLOGY
- Modeling inoculum dose dependent patterns of acute virus infections
- (2014) Yan Li et al. JOURNAL OF THEORETICAL BIOLOGY
- Trade-offs between and within scales: environmental persistence and within-host fitness of avian influenza viruses
- (2014) A. Handel et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Neuraminidase inhibitors for preventing and treating influenza in healthy adults and children
- (2014) Tom Jefferson et al. Sao Paulo Medical Journal
- Virulence and Pathogenesis of HIV-1 Infection: An Evolutionary Perspective
- (2014) C. Fraser et al. SCIENCE
- Adaptive Evolution and Environmental Durability Jointly Structure Phylodynamic Patterns in Avian Influenza Viruses
- (2014) Benjamin Roche et al. PLOS BIOLOGY
- Quantifying the Contribution of Hosts with Different Parasite Concentrations to the Transmission of Visceral Leishmaniasis in Ethiopia
- (2014) Ezer Miller et al. PLoS Neglected Tropical Diseases
- Effectiveness of neuraminidase inhibitors in reducing mortality in patients admitted to hospital with influenza A H1N1pdm09 virus infection: a meta-analysis of individual participant data
- (2014) Stella G Muthuri et al. Lancet Respiratory Medicine
- The Impact of Illness on Social Networks: Implications for Transmission and Control of Influenza
- (2013) Kim Van Kerckhove et al. AMERICAN JOURNAL OF EPIDEMIOLOGY
- Systematic review of influenza A(H1N1)pdm09 virus shedding: duration is affected by severity, but not age
- (2013) James E. Fielding et al. Influenza and Other Respiratory Viruses
- Mother-to-infant transmission of hepatitis B virus infection: Significance of maternal viral load and strategies for intervention
- (2013) Wan-Hsin Wen et al. JOURNAL OF HEPATOLOGY
- Heterogeneity in Viral Shedding Among Individuals With Medically Attended Influenza A Virus Infection
- (2013) Lincoln L. H. Lau et al. JOURNAL OF INFECTIOUS DISEASES
- Exposure to Influenza Virus Aerosols During Routine Patient Care
- (2013) Werner E. Bischoff et al. JOURNAL OF INFECTIOUS DISEASES
- Household Transmission of Influenza (H1N1-2009) in Japan: Age-Specificity and Reduction of Household Transmission Risk by Zanamivir Treatment
- (2013) H Nishiura et al. JOURNAL OF INTERNATIONAL MEDICAL RESEARCH
- Time and dose-dependent risk of pneumococcal pneumonia following influenza: a model for within-host interaction between influenza and Streptococcus pneumoniae
- (2013) S. Shrestha et al. Journal of the Royal Society Interface
- Towards multiscale modeling of influenza infection
- (2013) Lisa N. Murillo et al. JOURNAL OF THEORETICAL BIOLOGY
- The Short Stalk Length of Highly Pathogenic Avian Influenza H5N1 Virus Neuraminidase Limits Transmission of Pandemic H1N1 Virus in Ferrets
- (2013) D. Blumenkrantz et al. JOURNAL OF VIROLOGY
- Sample Size Considerations for One-to-One Animal Transmission Studies of the Influenza A Viruses
- (2013) Hiroshi Nishiura et al. PLoS One
- Host and viral features of human dengue cases shape the population of infected and infectious Aedes aegypti mosquitoes
- (2013) N. M. Nguyen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Effectiveness of antiviral prophylaxis coupled with contact tracing in reducing the transmission of the influenza A (H1N1-2009): a systematic review
- (2013) Kenji Mizumoto et al. Theoretical Biology and Medical Modelling
- Aerosol transmission is an important mode of influenza A virus spread
- (2013) Benjamin J. Cowling et al. Nature Communications
- A Multi-scale Analysis of Influenza A Virus Fitness Trade-offs due to Temperature-dependent Virus Persistence
- (2013) Andreas Handel et al. PLoS Computational Biology
- Phlebotomus orientalis Sand Flies from Two Geographically Distant Ethiopian Localities: Biology, Genetic Analyses and Susceptibility to Leishmania donovani
- (2013) Veronika Seblova et al. PLoS Neglected Tropical Diseases
- Effect of oseltamivir, zanamivir or oseltamivir–zanamivir combination treatments on transmission of influenza in households
- (2012) Fabrice Carrat et al. ANTIVIRAL THERAPY
- Effectiveness of oseltamivir in adults: a meta-analysis of published and unpublished clinical trials
- (2012) M. H. Ebell et al. FAMILY PRACTICE
- Chronic Toxoplasma Infection Modifies the Structure and the Risk of Host Behavior
- (2012) Cristina Afonso et al. PLoS One
- A Comprehensive Breath Plume Model for Disease Transmission via Expiratory Aerosols
- (2012) Siobhan K. Halloran et al. PLoS One
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- (2012) Leslie A. Reperant et al. PLoS One
- P. falciparum Infection Durations and Infectiousness Are Shaped by Antigenic Variation and Innate and Adaptive Host Immunity in a Mathematical Model
- (2012) Philip Eckhoff PLoS One
- Transmission of a 2009 H1N1 Pandemic Influenza Virus Occurs before Fever Is Detected, in the Ferret Model
- (2012) Kim L. Roberts et al. PLoS One
- Nested model reveals potential amplification of an HIV epidemic due to drug resistance
- (2012) Roberto A. Saenz et al. Epidemics
- The ferret as a model organism to study influenza A virus infection
- (2011) J. A. Belser et al. Disease Models & Mechanisms
- BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: THEORY
- (2011) Troy Day et al. EVOLUTION
- BRIDGING SCALES IN THE EVOLUTION OF INFECTIOUS DISEASE LIFE HISTORIES: APPLICATION
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- From superspreaders to disease hotspots: linking transmission across hosts and space
- (2011) Sara H Paull et al. FRONTIERS IN ECOLOGY AND THE ENVIRONMENT
- Lack of transmission of a human influenza virus with avian receptor specificity between ferrets is not due to decreased virus shedding but rather a lower infectivity in vivo
- (2011) K. L. Roberts et al. JOURNAL OF GENERAL VIROLOGY
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- (2010) Kelvin K. W. To et al. CLINICAL INFECTIOUS DISEASES
- Viral Shedding and Clinical Illness in Naturally Acquired Influenza Virus Infections
- (2010) Lincoln L. H. Lau et al. JOURNAL OF INFECTIOUS DISEASES
- Modelling the influence of human behaviour on the spread of infectious diseases: a review
- (2010) Sebastian Funk et al. Journal of the Royal Society Interface
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- (2010) K.M. Pepin et al. JOURNAL OF THEORETICAL BIOLOGY
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- (2010) R. A. Saenz et al. JOURNAL OF VIROLOGY
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- (2010) L. Canini et al. JOURNAL OF VIROLOGY
- Ebola haemorrhagic fever
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- Methods of modelling viral disease dynamics across the within- and between-host scales: the impact of virus dose on host population immunity
- (2010) S. H. Steinmeyer et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Epidemiological and clinical consequences of within-host evolution
- (2010) Samuel Alizon et al. TRENDS IN MICROBIOLOGY
- The effect of inoculation dose of a highly pathogenic avian influenza virus strain H5N1 on the infectiousness of chickens
- (2010) D. Spekreijse et al. VETERINARY MICROBIOLOGY
- A Bayesian model for evaluating influenza antiviral efficacy in household studies with asymptomatic infections
- (2009) Y. Yang et al. BIOSTATISTICS
- Understanding influenza virus-specific epidemiological properties by analysis of experimental human infections
- (2009) C.-M. LIAO et al. EPIDEMIOLOGY AND INFECTION
- Viral kinetics and exhaled droplet size affect indoor transmission dynamics of influenza infection
- (2009) S. C. Chen et al. INDOOR AIR
- Antibiotic Treatment of Clostridium difficile Carrier Mice Triggers a Supershedder State, Spore-Mediated Transmission, and Severe Disease in Immunocompromised Hosts
- (2009) T. D. Lawley et al. INFECTION AND IMMUNITY
- Effects of Infectious Virus Dose and Bloodmeal Delivery Method on Susceptibility ofAedes aegyptiandAedes albopictusto Chikungunya Virus
- (2009) Kendra Pesko et al. JOURNAL OF MEDICAL ENTOMOLOGY
- Aerosol transmission of influenza A virus: a review of new studies
- (2009) R. Tellier Journal of the Royal Society Interface
- Primary High-Dose Murine Norovirus 1 Infection Fails To Protect from Secondary Challenge with Homologous Virus
- (2009) G. Liu et al. JOURNAL OF VIROLOGY
- Environmental transmission of low pathogenicity avian influenza viruses and its implications for pathogen invasion
- (2009) P. Rohani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Intervention strategies for an influenza pandemic taking into account secondary bacterial infections
- (2009) Andreas Handel et al. Epidemics
- Antigenic Diversity, Transmission Mechanisms, and the Evolution of Pathogens
- (2009) Alexander Lange et al. PLoS Computational Biology
- The Evolutionary Dynamics of a Rapidly Mutating Virus within and between Hosts: The Case of Hepatitis C Virus
- (2009) Fabio Luciani et al. PLoS Computational Biology
- Time Lines of Infection and Disease in Human Influenza: A Review of Volunteer Challenge Studies
- (2008) Fabrice Carrat et al. AMERICAN JOURNAL OF EPIDEMIOLOGY
- Surviving the Bottleneck: Transmission Mutants and the Evolution of Microbial Populations
- (2008) A. Handel et al. GENETICS
- Virulence evolution and the trade-off hypothesis: history, current state of affairs and the future
- (2008) S. ALIZON et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- HIV-1 Transmission, by Stage of Infection
- (2008) T. Déirdre Hollingsworth et al. JOURNAL OF INFECTIOUS DISEASES
- Inapparent infections and cholera dynamics
- (2008) Aaron A. King et al. NATURE
- On the evolution of reproductive restraint in malaria
- (2008) N. Mideo et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases
- (2008) N MIDEO et al. TRENDS IN ECOLOGY & EVOLUTION
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