An Approach to Identify Individual Functional Single Nucleotide Polymorphisms and Isoform MicroRNAs

IsomiR Bank: a research resource for tracking IsomiRs

(2016) Yuanwei Zhang et al.   BIOINFORMATICS

miR-isomiRExp: a web-server for the analysis of expression of miRNA at the miRNA/isomiR levels

(2016) Li Guo et al.   Scientific Reports

Improving classification of mature microRNA by solving class imbalance problem

(2016) Ying Wang et al.   Scientific Reports

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

SubmiRine: assessing variants in microRNA targets using clinical genomic data sets

(2015) Evan K. Maxwell et al.   NUCLEIC ACIDS RESEARCH

miRVaS: a tool to predict the impact of genetic variants on miRNAs

(2015) Sophia Cammaerts et al.   NUCLEIC ACIDS RESEARCH

An update of miRNASNP database for better SNP selection by GWAS data, miRNA expression and online tools

(2015) Jing Gong et al.   Database-The Journal of Biological Databases and Curation

MatPred: Computational Identification of Mature MicroRNAs within Novel Pre-MicroRNAs

(2015) Jin Li et al.   Biomed Research International

MiRduplexSVM: A High-Performing MiRNA-Duplex Prediction and Evaluation Methodology

(2015) Nestoras Karathanasis et al.   PLoS One

Human genetic variation and its effect on miRNA biogenesis, activity and function

(2014) Daniel R. Hogg et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

mrSNP: Software to detect SNP effects on microRNA binding

(2014) Mehmet Deveci et al.   BMC BIOINFORMATICS

A challenge for miRNA: multiple isomiRs in miRNAomics

(2014) Li Guo et al.   GENE

Regulation of microRNA biogenesis

(2014) Minju Ha et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

The human splicing code reveals new insights into the genetic determinants of disease

(2014) H. Y. Xiong et al.   SCIENCE

isomiRex: Web-based identification of microRNAs, isomiR variations and differential expression using next-generation sequencing datasets

(2013) Gaurav Sablok et al.   FEBS LETTERS

Computational prediction of the localization of microRNAs within their pre-miRNA

(2013) Mickael Leclercq et al.   NUCLEIC ACIDS RESEARCH

PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological pathways

(2013) Anindya Bhattacharya et al.   NUCLEIC ACIDS RESEARCH

MirSNP, a database of polymorphisms altering miRNA target sites, identifies miRNA-related SNPs in GWAS SNPs and eQTLs

(2012) Chenxing Liu et al.   BMC GENOMICS

Widespread translational control contributes to the regulation of Arabidopsis photomorphogenesis

(2012) Ming-Jung Liu et al.   Molecular Systems Biology

Prediction of Conserved Precursors of miRNAs and Their Mature Forms by Integrating Position-Specific Structural Features

(2012) Goro Terai et al.   PLoS One

IsomiRs – the overlooked repertoire in the dynamic microRNAome

(2012) Corine T. Neilsen et al.   TRENDS IN GENETICS

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences

(2011) Yonggan Wu et al.   BMC BIOINFORMATICS

miRvar: A comprehensive database for genomic variations in microRNAs

(2011) Deeksha Bhartiya et al.   HUMAN MUTATION

Evolution of microRNA diversity and regulation in animals

(2011) Eugene Berezikov   NATURE REVIEWS GENETICS

Inferring causative variants in microRNA target sites

(2011) Laurent F. Thomas et al.   NUCLEIC ACIDS RESEARCH

MaturePred: Efficient Identification of MicroRNAs within Novel Plant Pre-miRNAs

(2011) Ping Xuan et al.   PLoS One

mirExplorer: Detecting microRNAs from genome and next generation sequencing data using the AdaBoost method with transition probability matrix and combined features

(2011) Dao-Gang Guan et al.   RNA Biology

MicroSNiPer: a web tool for prediction of SNP effects on putative microRNA targets

(2010) Maxim Barenboim et al.   HUMAN MUTATION

Posttranscriptional Regulation of MicroRNA Biogenesis in Animals

(2010) Haruhiko Siomi et al.   MOLECULAR CELL

The widespread regulation of microRNA biogenesis, function and decay

(2010) Jacek Krol et al.   NATURE REVIEWS GENETICS

MatureBayes: A Probabilistic Algorithm for Identifying the Mature miRNA within Novel Precursors

(2010) Katerina Gkirtzou et al.   PLoS One

SNPs in human miRNA genes affect biogenesis and function

(2009) G. Sun et al.   RNA