Bacterial communities differ between plant species and soil type, and differentially influence seedling establishment on serpentine soils

Assessment of arsenic oxidation potential of Microvirga indica S-MI1b sp. nov. in heavy metal polluted environment

(2018) Savita R. Tapase et al.   CHEMOSPHERE

Microbial decomposers not constrained by climate history along a Mediterranean climate gradient in southern California

(2018) Nameer R. Baker et al.   ECOLOGY

Distinct responses of soil bacterial and fungal communities to changes in fertilization regime and crop rotation

(2018) Chao Ai et al.   GEODERMA

Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits

(2018) Jonathan W. Leff et al.   ISME Journal

Soil abiotic variables are more important than Salicaceae phylogeny or habitat specialization in determining soil microbial community structure

(2018) Sonya Erlandson et al.   MOLECULAR ECOLOGY

Assembly and ecological function of the root microbiome across angiosperm plant species

(2018) Connor R. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial communities in the rhizosphere of different populations of the Ni-hyperaccumulator Alyssum serpyllifolium and the metal-excluder Dactylis glomerata growing in ultramafic soils

(2018) M. Touceda-González et al.   PLANT AND SOIL

Effects of Phytoremediation Treatment on Bacterial Community Structure and Diversity in Different Petroleum-Contaminated Soils

(2018) Yuanyuan Shen et al.   International Journal of Environmental Research and Public Health

25 years of serving the community with ribosomal RNA gene reference databases and tools

(2017) Frank Oliver Glöckner et al.   JOURNAL OF BIOTECHNOLOGY

The seed endosphere of Anadenanthera colubrina is inhabited by a complex microbiota, including Methylobacteriumspp. and Staphylococcus spp. with potential plant-growth promoting activities

(2017) Pasquale Alibrandi et al.   PLANT AND SOIL

Tree genetics defines fungal partner communities that may confer drought tolerance

(2017) Catherine A. Gehring et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exposure to the leaf litter microbiome of healthy adults protects seedlings from pathogen damage

(2017) Natalie Christian et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Keystone microbial taxa regulate the invasion of a fungal pathogen in agro-ecosystems

(2017) P. Trivedi et al.   SOIL BIOLOGY & BIOCHEMISTRY

Application of Endophytic Pseudomonas fluorescens and a Bacterial Consortium to Brassica napus Can Increase Plant Height and Biomass under Greenhouse and Field Conditions

(2017) Richard D. Lally et al.   Frontiers in Plant Science

pH is the primary determinant of the bacterial community structure in agricultural soils impacted by polycyclic aromatic hydrocarbon pollution

(2017) Yucheng Wu et al.   Scientific Reports

Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes

(2016) Florence Mus et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Home-field advantage? evidence of local adaptation among plants, soil, and arbuscular mycorrhizal fungi through meta-analysis

(2016) Megan A. Rúa et al.   BMC EVOLUTIONARY BIOLOGY

The role of locally adapted mycorrhizas and rhizobacteria in plant-soil feedback systems

(2016) Daniel Revillini et al.   FUNCTIONAL ECOLOGY

Association mapping reveals novel serpentine adaptation gene clusters in a population of symbiotic Mesorhizobium

(2016) Stephanie S Porter et al.   ISME Journal

Rhizobacterial Community Structures Associated with Native Plants Grown in Chilean Extreme Environments

(2016) Milko A. Jorquera et al.   MICROBIAL ECOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Paenibacillus polymyxa BFKC01 enhances plant iron absorption via improved root systems and activated iron acquisition mechanisms

(2016) Cheng Zhou et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Microbial community dynamics in the rhizosphere of a cadmium hyper-accumulator

(2016) J. L. Wood et al.   Scientific Reports

Resilience vs. historical contingency in microbial responses to environmental change

(2015) Christine V. Hawkes et al.   ECOLOGY LETTERS

Influence of soil microbiota in nurse plant systems

(2015) Susana Rodríguez-Echeverría et al.   FUNCTIONAL ECOLOGY

Rhizosphere processes are quantitatively important components of terrestrial carbon and nutrient cycles

(2015) Adrien C. Finzi et al.   GLOBAL CHANGE BIOLOGY

Local adaptation in migrated interior Douglas-fir seedlings is mediated by ectomycorrhizas and other soil factors

(2015) Brian J. Pickles et al.   NEW PHYTOLOGIST

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping

(2015) Rakesh Santhanam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprasion of etanercept, etomidate and erythropoietin and their combinations in experimentally induced spinal cord injury

(2015) Murat Caliskan et al.   Turkish Neurosurgery

Soil microbial community variation correlates most strongly with plant species identity, followed by soil chemistry, spatial location and plant genus

(2015) J. H. Burns et al.   AoB Plants

Root Associated Bacillus sp. Improves Growth, Yield and Zinc Translocation for Basmati Rice (Oryza sativa) Varieties

(2015) Muhammad Shakeel et al.   Frontiers in Microbiology

Endophytic Cultivable Bacteria of the Metal Bioaccumulator Spartina maritima Improve Plant Growth but Not Metal Uptake in Polluted Marshes Soils

(2015) Jennifer Mesa et al.   Frontiers in Microbiology

Wild plant species growing closely connected in a subalpine meadow host distinct root-associated bacterial communities

(2015) Kristin Aleklett et al.   PeerJ

The nature of serpentine endemism

(2014) Brian L. Anacker   AMERICAN JOURNAL OF BOTANY

Soil chemical properties affect the reaction of forest soil bacteria to drought and rewetting stress

(2014) Marcin Chodak et al.   ANNALS OF MICROBIOLOGY

Testing predictions of the Janzen-Connell hypothesis: a meta-analysis of experimental evidence for distance- and density-dependent seed and seedling survival

(2014) Liza S. Comita et al.   JOURNAL OF ECOLOGY

Ecological Succession and Stochastic Variation in the Assembly of Arabidopsis thaliana Phyllosphere Communities

(2014) L. Maignien et al.   mBio

Exploring links between pH and bacterial community composition in soils from the Craibstone Experimental Farm

(2013) Andrea K. Bartram et al.   FEMS MICROBIOLOGY ECOLOGY

Characterization of Bacteria in the Rhizosphere Soils ofPolygonum Pubescensand Their Potential in Promoting Growth and Cd, Pb, Zn Uptake byBrassica napus

(2013) Yuan Xiao Jing et al.   INTERNATIONAL JOURNAL OF PHYTOREMEDIATION

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Root Exudation of Phytochemicals in Arabidopsis Follows Specific Patterns That Are Developmentally Programmed and Correlate with Soil Microbial Functions

(2013) Jacqueline M. Chaparro et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Patterns of microbial diversity along a salinity gradient in the Guerrero Negro solar saltern, Baja CA Sur, Mexico

(2013) Jesse G. Dillon et al.   Frontiers in Microbiology

New insights into the evolutionary history of biological nitrogen fixation

(2013) Eric S. Boyd et al.   Frontiers in Microbiology

Root traits contributing to plant productivity under drought

(2013) Louise H. Comas et al.   Frontiers in Plant Science

A standardized method for the sampling of rhizosphere and rhizoplan soil bacteria associated to a herbaceous root system

(2012) Cindy D. C. Barillot et al.   ANNALS OF MICROBIOLOGY

TRADE-OFFS, SPATIAL HETEROGENEITY, AND THE MAINTENANCE OF MICROBIAL DIVERSITY

(2012) Stephanie S. Porter et al.   EVOLUTION

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Rapid responses of soil microorganisms improve plant fitness in novel environments

(2012) J. A. Lau et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Skermanella stibiiresistens sp. nov., a highly antimony-resistant bacterium isolated from coal-mining soil, and emended description of the genus Skermanella

(2011) G. Luo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Evolutionary ecology of plant-microbe interactions: soil microbial structure alters selection on plant traits

(2011) Jennifer A. Lau et al.   NEW PHYTOLOGIST

Soil-mediated local adaptation alters seedling survival and performance

(2011) David Solance Smith et al.   PLANT AND SOIL

phangorn: phylogenetic analysis in R

(2010) Klaus Peter Schliep   BIOINFORMATICS

Soil microbial communities from an elevational cline differ in their effect on conifer seedling growth

(2010) Cameron Wagg et al.   PLANT AND SOIL

Occurrence and diversity of nitrogen-fixingSphingomonasbacteria associated with rice plants grown in Brazil

(2009) Sandy Sampaio Videira et al.   FEMS MICROBIOLOGY LETTERS

Are Oaks Locally Adapted to Serpentine Soils?

(2009) Sara Branco   NORTHEASTERN NATURALIST

Serpentine soil has little influence on the root-associated microbial community composition of the serpentine tolerant grass species Avenula sulcata

(2009) Michael S. Fitzsimons et al.   PLANT AND SOIL

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

Plant-soil feedbacks: a meta-analytical review

(2008) Andrew Kulmatiski et al.   ECOLOGY LETTERS

Serpentine and non-serpentine ecotypes ofCollinsia sparsifloraassociate with distinct arbuscular mycorrhizal fungal assemblages

(2008) S. P. SCHECHTER et al.   MOLECULAR ECOLOGY

Testing nickel tolerance of Sorghastrum nutans and its associated soil microbial community from serpentine and prairie soils

(2007) Jennifer H. Doherty et al.   ENVIRONMENTAL POLLUTION