SIRT7 mediates L1 elements transcriptional repression and their association with the nuclear lamina
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Title
SIRT7 mediates L1 elements transcriptional repression and their association with the nuclear lamina
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume -, Issue -, Pages -
Publisher
Oxford University Press (OUP)
Online
2019-06-04
DOI
10.1093/nar/gkz519
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Related references
Note: Only part of the references are listed.- L1 drives IFN in senescent cells and promotes age-associated inflammation
- (2019) Marco De Cecco et al. NATURE
- LINE1 Derepression in Aged Wild-Type and SIRT6-Deficient Mice Drives Inflammation
- (2019) Matthew Simon et al. Cell Metabolism
- LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo
- (2017) Joanna W Jachowicz et al. NATURE GENETICS
- Intact piRNA pathway prevents L1 mobilization in male meiosis
- (2017) Simon J. Newkirk et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mammalian HP1 Isoforms Have Specific Roles in Heterochromatin Structure and Organization
- (2017) Laia Bosch-Presegué et al. Cell Reports
- Dynamic silencing of somatic L1 retrotransposon insertions reflects the developmental and cellular contexts of their genomic integration
- (2017) Manoj Kannan et al. Mobile DNA
- SIRT7 promotes genome integrity and modulates non‐homologous end joining DNA repair
- (2016) Berta N Vazquez et al. EMBO JOURNAL
- Histones and histone modifications in perinuclear chromatin anchoring: from yeast to man
- (2016) Jennifer C Harr et al. EMBO REPORTS
- A hot L1 retrotransposon evades somatic repression and initiates human colorectal cancer
- (2016) Emma C. Scott et al. GENOME RESEARCH
- SIRT6 deacetylates H3K18ac at pericentric chromatin to prevent mitotic errors and cellular senescence
- (2016) Luisa Tasselli et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- A comprehensive approach to expression of L1 loci
- (2016) Prescott Deininger et al. NUCLEIC ACIDS RESEARCH
- deepTools2: a next generation web server for deep-sequencing data analysis
- (2016) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- Epigenetic Determinants of Cancer
- (2016) Stephen B. Baylin et al. Cold Spring Harbor Perspectives in Biology
- SIRT6 deacetylates H3K18ac at pericentric chromatin to prevent mitotic errors and cellular senescence
- (2016) Luisa Tasselli et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Restricting retrotransposons: a review
- (2016) John L. Goodier Mobile DNA
- Epigenetics and aging
- (2016) S. Pal et al. Science Advances
- Transposable elements become active and mobile in the genomes of aging mammalian somatic tissues
- (2016) Marco De Cecco et al. Aging-US
- Lamins: Nuclear Intermediate Filament Proteins with Fundamental Functions in Nuclear Mechanics and Genome Regulation
- (2015) Yosef Gruenbaum et al. Annual Review of Biochemistry
- Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells
- (2015) Jop Kind et al. CELL
- Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins
- (2015) Jennifer C. Harr et al. JOURNAL OF CELL BIOLOGY
- Lamin A Is an Endogenous SIRT6 Activator and Promotes SIRT6-Mediated DNA Repair
- (2015) Shrestha Ghosh et al. Cell Reports
- Silencing of LINE-1 retrotransposons contributes to variation in small noncoding RNA expression in human cancer cells
- (2015) Stephen Ohms et al. Oncotarget
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- SIRT7 Controls Hepatic Lipid Metabolism by Regulating the Ubiquitin-Proteasome Pathway
- (2014) Tatsuya Yoshizawa et al. Cell Metabolism
- Reprogramming the Methylome: Erasing Memory and Creating Diversity
- (2014) Heather J. Lee et al. Cell Stem Cell
- Genetics of aging, progeria and lamin disorders
- (2014) Shrestha Ghosh et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Evolutionally dynamic L1 regulation in embryonic stem cells
- (2014) N. Castro-Diaz et al. GENES & DEVELOPMENT
- piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells
- (2014) D. Pezic et al. GENES & DEVELOPMENT
- Epigenetics of Aging and Aging-related Disease
- (2014) A. Brunet et al. JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES
- Suv39h-Dependent H3K9me3 Marks Intact Retrotransposons and Silences LINE Elements in Mouse Embryonic Stem Cells
- (2014) Aydan Bulut-Karslioglu et al. MOLECULAR CELL
- metaseq: a Python package for integrative genome-wide analysis reveals relationships between chromatin insulators and associated nuclear mRNA
- (2014) Ryan K. Dale et al. NUCLEIC ACIDS RESEARCH
- SIRT6 represses LINE1 retrotransposons by ribosylating KAP1 but this repression fails with stress and age
- (2014) Michael Van Meter et al. Nature Communications
- The Hallmarks of Aging
- (2013) Carlos López-Otín et al. CELL
- Endogenous Retrotransposition Activates Oncogenic Pathways in Hepatocellular Carcinoma
- (2013) Ruchi Shukla et al. CELL
- LBR and Lamin A/C Sequentially Tether Peripheral Heterochromatin and Inversely Regulate Differentiation
- (2013) Irina Solovei et al. CELL
- The tumor suppressor SirT2 regulates cell cycle progression and genome stability by modulating the mitotic deposition of H4K20 methylation
- (2013) L. Serrano et al. GENES & DEVELOPMENT
- Lamin B1 depletion in senescent cells triggers large-scale changes in gene expression and the chromatin landscape
- (2013) P. P. Shah et al. GENES & DEVELOPMENT
- Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA
- (2013) Anas Fadloun et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- SIRT7 Represses Myc Activity to Suppress ER Stress and Prevent Fatty Liver Disease
- (2013) Jiyung Shin et al. Cell Reports
- Long Interspersed Element–1 (LINE-1): Passenger or Driver in Human Neoplasms?
- (2013) Nemanja Rodić et al. PLoS Genetics
- Revisiting the evolution of mouse LINE-1 in the genomic era
- (2013) Akash Sookdeo et al. Mobile DNA
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- DNA Sequence-Dependent Compartmentalization and Silencing of Chromatin at the Nuclear Lamina
- (2012) Joseph M. Zullo et al. CELL
- Single-Neuron Sequencing Analysis of L1 Retrotransposition and Somatic Mutation in the Human Brain
- (2012) Gilad D. Evrony et al. CELL
- Resveratrol Rescues SIRT1-Dependent Adult Stem Cell Decline and Alleviates Progeroid Features in Laminopathy-Based Progeria
- (2012) Baohua Liu et al. Cell Metabolism
- Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence
- (2012) W. Meuleman et al. GENOME RESEARCH
- The Nuclear Envelope Protein Emerin Binds Directly to Histone Deacetylase 3 (HDAC3) and Activates HDAC3 Activity
- (2012) Justin Demmerle et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation
- (2012) Matthew F. Barber et al. NATURE
- Sirtuins as regulators of metabolism and healthspan
- (2012) Riekelt H. Houtkooper et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The nuclear lamins: flexibility in function
- (2012) Brian Burke et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- In Vivo Control of CpG and Non-CpG DNA Methylation by DNA Methyltransferases
- (2012) Julia Arand et al. PLoS Genetics
- Pybedtools: a flexible Python library for manipulating genomic datasets and annotations
- (2011) Ryan K. Dale et al. BIOINFORMATICS
- Somatic retrotransposition alters the genetic landscape of the human brain
- (2011) J. Kenneth Baillie et al. NATURE
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Hdac3 Is Essential for the Maintenance of Chromatin Structure and Genome Stability
- (2010) Srividya Bhaskara et al. CANCER CELL
- Loss of a DNA binding site within the tail of prelamin A contributes to altered heterochromatin anchorage by progerin
- (2010) Francine Bruston et al. FEBS LETTERS
- Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation
- (2010) Daan Peric-Hupkes et al. MOLECULAR CELL
- Epigenetic silencing of engineered L1 retrotransposition events in human embryonic carcinoma cells
- (2010) Jose L. Garcia-Perez et al. NATURE
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- Somatic expression of LINE-1 elements in human tissues
- (2010) Victoria P. Belancio et al. NUCLEIC ACIDS RESEARCH
- Estimating enrichment of repetitive elements from high-throughput sequence data
- (2010) Daniel S Day et al. GENOME BIOLOGY
- CEAS: cis-regulatory element annotation system
- (2009) Hyunjin Shin et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- L1 retrotransposition in human neural progenitor cells
- (2009) Nicole G. Coufal et al. NATURE
- The regulated retrotransposon transcriptome of mammalian cells
- (2009) Geoffrey J Faulkner et al. NATURE GENETICS
- Genetic Evidence That the Non-Homologous End-Joining Repair Pathway Is Involved in LINE Retrotransposition
- (2009) Jun Suzuki et al. PLoS Genetics
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- L1 mobile element expression causes multiple types of toxicity
- (2008) Nicholas A. Wallace et al. GENE
- A piRNA Pathway Primed by Individual Transposons Is Linked to De Novo DNA Methylation in Mice
- (2008) Alexei A. Aravin et al. MOLECULAR CELL
- Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
- (2008) Lars Guelen et al. NATURE
- Transcriptional repression mediated by repositioning of genes to the nuclear lamina
- (2008) K. L. Reddy et al. NATURE
- Combinatorial patterns of histone acetylations and methylations in the human genome
- (2008) Zhibin Wang et al. NATURE GENETICS
- Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells
- (2008) Lee E. Finlan et al. PLoS Genetics
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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