Identifying the growth associating genes of Nannochloropsis oceanica by bulked mutant analysis (BMA) and RNA sequencing (BMR-seq)
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Identifying the growth associating genes of Nannochloropsis oceanica by bulked mutant analysis (BMA) and RNA sequencing (BMR-seq)
Authors
Keywords
<em class="EmphasisTypeItalic ">Nannochloropsis oceanica</em>, Eustigmatophyceae, Bulked mutant analysis, BMA, Bulked mutant RNA sequencing, BMR-seq, Growth performance associating locus
Journal
JOURNAL OF APPLIED PHYCOLOGY
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-07-24
DOI
10.1007/s10811-019-01867-w
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis
- (2019) Xiaobo Li et al. NATURE GENETICS
- Unrestrained markerless trait stacking inNannochloropsis gaditanathrough combined genome editing and marker recycling technologies
- (2018) John Verruto et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Exploring the chemodiversity of tropical microalgae for the discovery of natural antifouling compounds
- (2018) Damien Réveillon et al. JOURNAL OF APPLIED PHYCOLOGY
- Structural Variation Analysis of Mutated Nannochloropsis oceanica Caused by Zeocin Through Genome Re-Sequencing
- (2018) Genmei Lin et al. Journal of Ocean University of China
- Building a multipurpose insertional mutant library for forward and reverse genetics in Chlamydomonas
- (2017) Xi Cheng et al. Plant Methods
- Efficient targeted DNA editing and replacement inChlamydomonas reinhardtiiusing Cpf1 ribonucleoproteins and single-stranded DNA
- (2017) Aron Ferenczi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Verification of mutagen function of Zeocin in Nannochloropsis oceanica through transcriptome analysis
- (2017) Genmei Lin et al. Journal of Ocean University of China
- An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii
- (2016) Xiaobo Li et al. PLANT CELL
- Genome editing of model oleaginous microalgaeNannochloropsisspp. by CRISPR/Cas9
- (2016) Qintao Wang et al. PLANT JOURNAL
- DNA-free two-gene knockout in Chlamydomonas reinhardtii via CRISPR-Cas9 ribonucleoproteins
- (2016) Kwangryul Baek et al. Scientific Reports
- Microalgae as a new source of bioactive compounds in food supplements
- (2016) Bruna da Silva Vaz et al. Current Opinion in Food Science
- Extreme-phenotype genome-wide association study (XP-GWAS): a method for identifying trait-associated variants by sequencing pools of individuals selected from a diversity panel
- (2015) Jinliang Yang et al. PLANT JOURNAL
- Verification and validation of bioinformatics software without a gold standard: a case study of BWA and Bowtie
- (2014) Eleni Giannoulatou et al. BMC BIOINFORMATICS
- High-Throughput Genotyping of Green Algal Mutants Reveals Random Distribution of Mutagenic Insertion Sites and Endonucleolytic Cleavage of Transforming DNA
- (2014) R. Zhang et al. PLANT CELL
- The Hierarchy of the 3D Genome
- (2013) Johan H. Gibcus et al. MOLECULAR CELL
- MutMap-Gap: whole-genome resequencing of mutant F2 progeny bulk combined withde novoassembly of gap regions identifies the rice blast resistance genePii
- (2013) Hiroki Takagi et al. NEW PHYTOLOGIST
- QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations
- (2013) Hiroki Takagi et al. PLANT JOURNAL
- Enhanced Lipid Productivity and Photosynthesis Efficiency in a Desmodesmus sp. Mutant Induced by Heavy Carbon Ions
- (2013) Guangrong Hu et al. PLoS One
- MutMap+: Genetic Mapping and Mutant Identification without Crossing in Rice
- (2013) Rym Fekih et al. PLoS One
- Characterization of microalga Nannochloropsis sp. mutants for improved production of biofuels
- (2012) Kandiah Anandarajah et al. APPLIED ENERGY
- Isolation and partial characterization of mutants with elevated lipid content in Chlorella sorokiniana and Scenedesmus obliquus
- (2012) Hélène Vigeolas et al. JOURNAL OF BIOTECHNOLOGY
- Hi–C: A comprehensive technique to capture the conformation of genomes
- (2012) Jon-Matthew Belton et al. METHODS
- Genome sequencing reveals agronomically important loci in rice using MutMap
- (2012) Akira Abe et al. NATURE BIOTECHNOLOGY
- Gene Mapping via Bulked Segregant RNA-Seq (BSR-Seq)
- (2012) Sanzhen Liu et al. PLoS One
- Effects of acrylamide exposure on serum hormones, gene expression, cell proliferation, and histopathology in male reproductive tissues of Fischer 344 rats
- (2012) L. Camacho et al. TOXICOLOGY LETTERS
- Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779
- (2012) Astrid Vieler et al. PLoS Genetics
- Chromatin interaction networks and higher order architectures of eukaryotic genomes
- (2011) Kuljeet Singh Sandhu et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- NUCLEAR MONOPLOIDY AND ASEXUAL PROPAGATION OF NANNOCHLOROPSIS OCEANICA (EUSTIGMATOPHYCEAE) AS REVEALED BY ITS GENOME SEQUENCE1
- (2011) Kehou Pan et al. JOURNAL OF PHYCOLOGY
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Life-cycle analysis on biodiesel production from microalgae: Water footprint and nutrients balance
- (2010) Jia Yang et al. BIORESOURCE TECHNOLOGY
- Golgi Calcium Pump Secretory Pathway Calcium ATPase 1 (SPCA1) Is a Key Regulator of Insulin-like Growth Factor Receptor (IGF1R) Processing in the Basal-like Breast Cancer Cell Line MDA-MB-231
- (2010) Desma M. Grice et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Active and passive mechanisms of helicases
- (2010) Maria Manosas et al. NUCLEIC ACIDS RESEARCH
- Repeat subtraction-mediated sequence capture from a complex genome
- (2010) Yan Fu et al. PLANT JOURNAL
- An Outlook on Microalgal Biofuels
- (2010) R. H. Wijffels et al. SCIENCE
- DEGseq: an R package for identifying differentially expressed genes from RNA-seq data
- (2009) Likun Wang et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- A biofuel strategy for Ireland with an emphasis on production of biomethane and minimization of land-take
- (2009) Anoop Singh et al. RENEWABLE & SUSTAINABLE ENERGY REVIEWS
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- The Phaeodactylum genome reveals the evolutionary history of diatom genomes
- (2008) Chris Bowler et al. NATURE
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now