Physiological and Transcriptomic Changes during the Early Phases of Adventitious Root Formation in Mulberry Stem Hardwood Cuttings

An Integrated Transcriptome and Proteome Analysis Reveals Putative Regulators of Adventitious Root Formation in Taxodium ‘Zhongshanshan’

(2019) Zhiquan Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

LBD16 and LBD18 acting downstream of ARF7 and ARF19 are involved in adventitious root formation in Arabidopsis

(2019) Han Woo Lee et al.   BMC PLANT BIOLOGY

Roles of the Clock in Controlling Starch Metabolism

(2019) Masanori Izumi   PLANT PHYSIOLOGY

Evolutionary analyses of NIN-like proteins in plants and their roles in nitrate signaling

(2019) Xiaohuan Mu et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Morphological and physiological responses to contrasting nitrogen regimes in Populus cathayana is linked to resources allocation and carbon/nitrogen partition

(2019) Jie Luo et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

miRNAs associated with auxin signaling, stress response, and cellular activities mediate adventitious root formation in apple rootstocks

(2019) Ke Li et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Determinants of Shoot Biomass Production in Mulberry: Combined Selection with Leaf Morphological and Physiological Traits

(2019) Xu Cao et al.   Plants-Basel

Growth performance, photosynthesis, and root characteristics are associated with nitrogen use efficiency in six poplar species

(2019) Jie Luo et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Genome-wide identification of BOR genes in poplar and their roles in response to various environmental stimuli

(2019) Jie Luo et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Pivotal role of LBD16 in root and root-like organ initiation

(2018) Wu Liu et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Aux/IAA Gene Family in Plants: Molecular Structure, Regulation, and Function

(2018) Jie Luo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

GmRAV1 regulates regeneration of roots and adventitious buds by the cytokinin signaling pathway in Arabidopsis and soybean

(2018) Kexin Zhang et al.   PHYSIOLOGIA PLANTARUM

The PIN-FORMED Auxin Efflux Carriers in Plants

(2018) Jing-Jing Zhou et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Inhibition of adventitious root development in apple rootstocks by cytokinin is based on its suppression of adventitious root primordia formation

(2018) Jiangping Mao et al.   PHYSIOLOGIA PLANTARUM

Comparative transcriptome reveals circadian and hormonal control of adventitious rooting in mulberry hardwood cuttings

(2018) Xu Cao et al.   ACTA PHYSIOLOGIAE PLANTARUM

MEDIATOR18 influences Arabidopsis root architecture, represses auxin signaling and is a critical factor for cell viability in root meristems

(2018) Javier Raya-González et al.   PLANT JOURNAL

Dynamic changes of phytohormone signaling in the base of Taxus media stem cuttings during adventitious root formation

(2018) Hongyan Ren et al.   SCIENTIA HORTICULTURAE

Molecular and physiological control of adventitious rooting in cuttings: phytohormone action meets resource allocation

(2018) Uwe Druege et al.   ANNALS OF BOTANY

In vitro propagation of bamboo species through axillary shoot proliferation: a review

(2017) Manpreet Sandhu et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Integration of genetic, genomic and transcriptomic information identifies putative regulators of adventitious root formation in Populus

(2016) Cintia L. Ribeiro et al.   BMC PLANT BIOLOGY

The conserved salt-responsive genes in the roots of Populus×canescens and Arabidopsis thaliana

(2016) Jie Luo et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Regulation of polar auxin transport by protein and lipid kinases

(2016) Laia Armengot et al.   JOURNAL OF EXPERIMENTAL BOTANY

iTRAQ Protein Profiling of Adventitious Root Formation in Mulberry Hardwood Cuttings

(2016) Zhuang Tang et al.   JOURNAL OF PLANT GROWTH REGULATION

Comprehensive Analysis of R2R3-MYB Genes During Adventitious Root Formation in Cuttings of Morus alba

(2016) Xiao Long Du et al.   JOURNAL OF PLANT GROWTH REGULATION

The WUSCHEL Related Homeobox Protein WOX7 Regulates the Sugar Response of Lateral Root Development in Arabidopsis thaliana

(2016) Danyu Kong et al.   Molecular Plant

PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis

(2016) Sibu Simon et al.   NEW PHYTOLOGIST

Auxin-IndependentNACPathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis

(2016) Xiaodong Chen et al.   PLANT PHYSIOLOGY

Plant Hormone Homeostasis, Signaling, and Function during Adventitious Root Formation in Cuttings

(2016) Uwe Druege et al.   Frontiers in Plant Science

Physiological and transcriptional regulation in poplar roots and leaves during acclimation to high temperature and drought

(2015) Jingbo Jia et al.   PHYSIOLOGIA PLANTARUM

Transcript profiling analysis reveals crucial genes regulating main metabolism during adventitious root formation in cuttings of Morus alba L.

(2015) XiaoLong Du et al.   PLANT GROWTH REGULATION

A Comparative Transcriptome Analysis Leads to New Insights into the Molecular Events Governing Root Formation in Mulberry Softwood Cuttings

(2015) Wei Du et al.   PLANT MOLECULAR BIOLOGY REPORTER

The Physiology of Adventitious Roots

(2015) Bianka Steffens et al.   PLANT PHYSIOLOGY

Global poplar root and leaf transcriptomes reveal links between growth and stress responses under nitrogen starvation and excess

(2015) Jie Luo et al.   TREE PHYSIOLOGY

The circadian clock rephases during lateral root organ initiation in Arabidopsis thaliana

(2015) Ute Voß et al.   Nature Communications

Adventitious Roots and Lateral Roots: Similarities and Differences

(2014) Catherine Bellini et al.   Annual Review of Plant Biology

Adventitious rooting declines with the vegetative to reproductive switch and involves a changed auxin homeostasis

(2014) Amanda Rasmussen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Auxin is a central player in the hormone cross-talks that control adventitious rooting

(2014) Daniel Ioan Pacurar et al.   PHYSIOLOGIA PLANTARUM

WOX11and12Are Involved in the First-Step Cell Fate Transition during de Novo Root Organogenesis inArabidopsis

(2014) Jingchun Liu et al.   PLANT CELL

Exogenous abscisic acid alleviates zinc uptake and accumulation inPopulus × canescensexposed to excess zinc

(2014) WEN-GUANG SHI et al.   PLANT CELL AND ENVIRONMENT

The role of auxin transporters in monocots development

(2014) Sara Balzan et al.   Frontiers in Plant Science

Auxin and cytokinin control formation of the quiescent centre in the adventitious root apex of arabidopsis

(2013) F. Della Rovere et al.   ANNALS OF BOTANY

Pathview: an R/Bioconductor package for pathway-based data integration and visualization

(2013) Weijun Luo et al.   BIOINFORMATICS

Nitrogen metabolism of two contrasting poplar species during acclimation to limiting nitrogen availability

(2013) Jie Luo et al.   JOURNAL OF EXPERIMENTAL BOTANY

The rooting of poplar cuttings: a review

(2013) Xiyang Zhao et al.   NEW FORESTS

Early steps of adventitious rooting: morphology, hormonal profiling and carbohydrate turnover in carnation stem cuttings

(2013) María Ángeles Agulló-Antón et al.   PHYSIOLOGIA PLANTARUM

Anatomical, physiological and transcriptional responses of two contrasting poplar genotypes to drought and re-watering

(2013) Xu Cao et al.   PHYSIOLOGIA PLANTARUM

Localized Induction of the ATP-Binding Cassette B19 Auxin Transporter Enhances Adventitious Root Formation in Arabidopsis

(2013) P. Sukumar et al.   PLANT PHYSIOLOGY

Identification, characterization of an AP2/ERF transcription factor that promotes adventitious, lateral root formation in Populus

(2013) Dalila Trupiano et al.   PLANTA

Distribution of indole-3-acetic acid in Petunia hybrida shoot tip cuttings and relationship between auxin transport, carbohydrate metabolism and adventitious root formation

(2013) Amir H. Ahkami et al.   PLANTA

When stress and development go hand in hand: main hormonal controls of adventitious rooting in cuttings

(2013) Cibele T. da Costa et al.   Frontiers in Plant Science

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Auxin ControlsArabidopsisAdventitious Root Initiation by Regulating Jasmonic Acid Homeostasis

(2012) Laurent Gutierrez et al.   PLANT CELL

Net fluxes of ammonium and nitrate in association with H+ fluxes in fine roots of Populus popularis

(2012) Jie Luo et al.   PLANTA

Ethylene inhibits lateral root development, increases IAA transport and expression of PIN3 and PIN7 auxin efflux carriers

(2011) Daniel R. Lewis et al.   DEVELOPMENT

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Photosynthesis, water use efficiency and stable carbon isotope composition are associated with anatomical properties of leaf and xylem in six poplar species

(2011) X. Cao et al.   PLANT BIOLOGY

Effects of phenolic compounds on adventitious root formation and oxidative decarboxylation of applied indoleacetic acid in Malus ‘Jork 9’

(2011) Geert-Jan De Klerk et al.   PLANT GROWTH REGULATION

Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis

(2011) M. Asahina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

CsSCL1 is differentially regulated upon maturation in chestnut microshoots and is specifically expressed in rooting-competent cells

(2011) J. M. Vielba et al.   TREE PHYSIOLOGY

Starch and the clock: the dark side of plant productivity

(2011) Alexander Graf et al.   TRENDS IN PLANT SCIENCE

The interaction between H2O2 and NO, Ca2+, cGMP, and MAPKs during adventitious rooting in mung bean seedlings

(2010) Shi-Weng Li et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

Dark exposure of petunia cuttings strongly improves adventitious root formation and enhances carbohydrate availability during rooting in the light

(2010) Yvonne Klopotek et al.   JOURNAL OF PLANT PHYSIOLOGY

Cytokinin Regulation of Auxin Synthesis inArabidopsisInvolves a Homeostatic Feedback Loop Regulated via Auxin and Cytokinin Signal Transduction

(2010) Brian Jones et al.   PLANT CELL

Influence of auxins, cytokinins, and nitrogen on production of rutin from callus and adventitious roots of the white mulberry tree (Morus alba L.)

(2010) Yew Lee et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Auxin regulates distal stem cell differentiation in Arabidopsis roots

(2010) Z. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adventitious rooting of conifers: influence of physical and chemical factors

(2010) Carla Ragonezi et al.   TREES-STRUCTURE AND FUNCTION

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

Wound-induced apoplastic peroxidase activities: their roles in the production and detoxification of reactive oxygen species

(2009) F. MINIBAYEVA et al.   PLANT CELL AND ENVIRONMENT

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis

(2008) Yves Deveaux et al.   BMC EVOLUTIONARY BIOLOGY

Anatomical and biochemical changes during adventitious rooting of apple rootstocks MM 106 cultured in vitro

(2008) Sélima Naija et al.   COMPTES RENDUS BIOLOGIES

Molecular physiology of adventitious root formation in Petunia hybrida cuttings: involvement of wound response and primary metabolism

(2008) Amir H. Ahkami et al.   NEW PHYTOLOGIST

Carbon-based secondary metabolites and internal nitrogen pools in Populus nigra under Free Air CO2 Enrichment (FACE) and nitrogen fertilisation

(2008) Zhi-Bin Luo et al.   PLANT AND SOIL