Complete Genomes of Symbiotic Cyanobacteria Clarify the Evolution of Vanadium-Nitrogenase

Assembly of long, error-prone reads using repeat graphs

(2019) Mikhail Kolmogorov et al.   NATURE BIOTECHNOLOGY

Distinctive characters of Nostoc genomes in cyanolichens

(2018) Andrey N. Gagunashvili et al.   BMC GENOMICS

Exploring the alternatives of biological nitrogen fixation

(2018) Florence Mus et al.   Metallomics

Genomic Changes Associated with the Evolutionary Transitions of Nostoc to a Plant Symbiont

(2018) Denis Warshan et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cycad coralloid roots contain bacterial communities including cyanobacteria and Caulobacter spp that encode niche-specific biosynthetic gene clusters

(2018) Karina Gutiérrez-García et al.   Genome Biology and Evolution

Day and night: Metabolic profiles and evolutionary relationships of six axenic non-marine cyanobacteria

(2018) Sabine Eva Will et al.   Genome Biology and Evolution

Fast and accurate de novo genome assembly from long uncorrected reads

(2017) Robert Vaser et al.   GENOME RESEARCH

Symbiotic Nitrogen Fixation and the Challenges to Its Extension to Nonlegumes

(2016) Florence Mus et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences

(2016) Heng Li   BIOINFORMATICS

Biological nitrogen fixation by alternative nitrogenases in boreal cyanolichens: importance of molybdenum availability and implications for current biological nitrogen fixation estimates

(2016) Romain Darnajoux et al.   NEW PHYTOLOGIST

Molybdenum and phosphorus limitation of moss-associated nitrogen fixation in boreal ecosystems

(2016) Kathrin Rousk et al.   NEW PHYTOLOGIST

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Lichen-symbiotic cyanobacteria associated withPeltigerahave an alternative vanadium-dependent nitrogen fixation system

(2014) Brendan P. Hodkinson et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Complete genome sequence of Anabaena variabilis ATCC 29413

(2014) Teresa Thiel et al.   Standards in Genomic Sciences

Regulation of V-nitrogenase genes inAnabaena variabilisby RNA processing and by dual repressors

(2013) Brenda S. Pratte et al.   MOLECULAR MICROBIOLOGY

Genome Erosion in a Nitrogen-Fixing Vertically Transmitted Endosymbiotic Multicellular Cyanobacterium

(2010) Liang Ran et al.   PLoS One

Plant-Growth-Promoting Rhizobacteria

(2009) Ben Lugtenberg et al.   Annual Review of Microbiology

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps

(2008) H. Tang et al.   GENOME RESEARCH