The impact of skin care products on skin chemistry and microbiome dynamics

Creating a 3D microbial and chemical snapshot of a human habitat

(2018) Clifford A. Kapono et al.   Scientific Reports

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

(2018) Anupriya Tripathi et al.   mSystems

Qiita: rapid, web-enabled microbiome meta-analysis

(2018) Antonio Gonzalez et al.   NATURE METHODS

Towards a bacterial treatment for armpit malodour

(2017) Chris Callewaert et al.   EXPERIMENTAL DERMATOLOGY

Inhibition ofPropionibacterium acneslipase activity by the antifungal agent ketoconazole

(2017) Mizuki Unno et al.   MICROBIOLOGY AND IMMUNOLOGY

Strains, functions and dynamics in the expanded Human Microbiome Project

(2017) Jason Lloyd-Price et al.   NATURE

Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis

(2017) Teruaki Nakatsuji et al.   Science Translational Medicine

Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

(2017) Robert A. Quinn et al.   TRENDS IN PHARMACOLOGICAL SCIENCES

Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae

(2017) Tal Luzzatto-Knaan et al.   eLife

Inter-personal diversity and temporal dynamics of dental, tongue, and salivary microbiota in the healthy oral cavity

(2017) Michael W. Hall et al.   npj Biofilms and Microbiomes

Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats

(2016) Daniel Petras et al.   ANALYTICAL CHEMISTRY

Signaling in Host-Associated Microbial Communities

(2016) Michael A. Fischbach et al.   CELL

Microbial Skin Inhabitants: Friends Forever

(2016) Pieter C. Dorrestein et al.   CELL

Temporal Stability of the Human Skin Microbiome

(2016) Julia Oh et al.   CELL

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Lifestyle chemistries from phones for individual profiling

(2016) Amina Bouslimani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Probiotic treatment restores protection against lethal fungal infection lost during amphibian captivity

(2016) Jordan G. Kueneman et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Individuality, Stability, and Variability of the Plaque Microbiome

(2016) Daniel R. Utter et al.   Frontiers in Microbiology

The effect of habitual and experimental antiperspirant and deodorant product use on the armpit microbiome

(2016) Julie Urban et al.   PeerJ

Avoiding Pandemic Fears in the Subway and Conquering the Platypus: TABLE 1 

(2016) A. Gonzalez et al.   mSystems

The Microbiota and Microbiome in Aging: Potential Implications in Health and Age-Related Diseases

(2015) Heidi J. Zapata et al.   JOURNAL OF THE AMERICAN GERIATRICS SOCIETY

A biosynthetic pathway for a prominent class of microbiota-derived bile acids

(2015) A Sloan Devlin et al.   Nature Chemical Biology

Molecular cartography of the human skin surface in 3D

(2015) Amina Bouslimani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Habitat fragmentation is associated to gut microbiota diversity of an endangered primate: implications for conservation

(2015) Claudia Barelli et al.   Scientific Reports

The microbiome of uncontacted Amerindians

(2015) J. C. Clemente et al.   Science Advances

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Deodorants and antiperspirants affect the axillary bacterial community

(2014) Chris Callewaert et al.   ARCHIVES OF DERMATOLOGICAL RESEARCH

The Earth Microbiome project: successes and aspirations

(2014) Jack A Gilbert et al.   BMC BIOLOGY

Bile acids and the gut microbiome

(2014) Jason M. Ridlon et al.   CURRENT OPINION IN GASTROENTEROLOGY

Biogeography and individuality shape function in the human skin metagenome

(2014) Julia Oh et al.   NATURE

Analysis of Anoxybacillus Genomes from the Aspects of Lifestyle Adaptations, Prophage Diversity, and Carbohydrate Metabolism

(2014) Kian Mau Goh et al.   PLoS One

Interacting Symbionts and Immunity in the Amphibian Skin Mucosome Predict Disease Risk and Probiotic Effectiveness

(2014) Douglas C. Woodhams et al.   PLoS One

Dialogue between skin microbiota and immunity

(2014) Y. Belkaid et al.   SCIENCE

Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Activation of the Jasmonic Acid Plant Defence Pathway Alters the Composition of Rhizosphere Bacterial Communities

(2013) Lilia C. Carvalhais et al.   PLoS One

Characterization of Staphylococcus and Corynebacterium Clusters in the Human Axillary Region

(2013) Chris Callewaert et al.   PLoS One

MS/MS networking guided analysis of molecule and gene cluster families

(2013) D. D. Nguyen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

EMPeror: a tool for visualizing high-throughput microbial community data

(2013) Yoshiki Vázquez-Baeza et al.   GigaScience

Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents

(2012) Martin J Blaser et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

A Bacterial Pathogen Co-opts Host Plasmin to Resist Killing by Cathelicidin Antimicrobial Peptides

(2012) Andrew Hollands et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Bile acid profiling in human biological samples: Comparison of extraction procedures and application to normal and cholestatic patients

(2012) Lydie Humbert et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Genomic variation landscape of the human gut microbiome

(2012) Siegfried Schloissnig et al.   NATURE

Mass spectral molecular networking of living microbial colonies

(2012) J. Watrous et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Molecular analysis of the prevalent microbiota of human male and female forehead skin compared to forearm skin and the influence of make-up

(2011) T. Staudinger et al.   JOURNAL OF APPLIED MICROBIOLOGY

Spectral archives: extending spectral libraries to analyze both identified and unidentified spectra

(2011) Ari M Frank et al.   NATURE METHODS

The skin microbiome

(2011) Elizabeth A. Grice et al.   NATURE REVIEWS MICROBIOLOGY

Chloroplast genomes of photosynthetic eukaryotes

(2011) Beverley R. Green   PLANT JOURNAL

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Moving pictures of the human microbiome

(2011) J Gregory Caporaso et al.   GENOME BIOLOGY

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

(2010) Tomáš Pluskal et al.   BMC BIOINFORMATICS

Proteomic identification of secreted proteins of Propionibacterium acnes

(2010) Carsten Holland et al.   BMC MICROBIOLOGY

Solubility of acetaminophen and ibuprofen in polyethylene glycol 600, propylene glycol and water mixtures at 25°C

(2010) Sh. Soltanpour et al.   JOURNAL OF MOLECULAR LIQUIDS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Medium Chain Acylcarnitines Dominate the Metabolite Pattern in Humans under Moderate Intensity Exercise and Support Lipid Oxidation

(2010) Rainer Lehmann et al.   PLoS One

Topographical and Temporal Diversity of the Human Skin Microbiome

(2009) E. A. Grice et al.   SCIENCE

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE