Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

Gut Microbiota as a Therapeutic Target for Metabolic Disorders

(2018) Hirofumi Okubo et al.   CURRENT MEDICINAL CHEMISTRY

A microbial signature for Crohn's disease

(2017) Victoria Pascal et al.   GUT

Significance estimation for large scale metabolomics annotations by spectral matching

(2017) Kerstin Scheubert et al.   Nature Communications

Gut microbiota as a potential target of metabolic syndrome: the role of probiotics and prebiotics

(2017) Mingqian He et al.   Cell and Bioscience

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

Discrete False-Discovery Rate Improves Identification of Differentially Abundant Microbes

(2017) Lingjing Jiang et al.   mSystems

Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns

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Health Care Savings: The Economic Value of Diagnostic and Therapeutic Care for Obstructive Sleep Apnea

(2016) Nathaniel F. Watson   Journal of Clinical Sleep Medicine

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

(2016) Mingxun Wang et al.   NATURE BIOTECHNOLOGY

Population-level analysis of gut microbiome variation

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Executive Summary to EDC-2: The Endocrine Society's Second Scientific Statement on Endocrine-Disrupting Chemicals

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Gender differences in obstructive sleep apnea and the associated public health burden

(2015) Janell McKinney et al.   Sleep and Biological Rhythms

Intermittent hypoxia alters gut microbiota diversity in a mouse model of sleep apnoea

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Intestinal Colonization by a Lachnospiraceae Bacterium Contributes to the Development of Diabetes in Obese Mice

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Diet rapidly and reproducibly alters the human gut microbiome

(2013) Lawrence A. David et al.   NATURE

EMPeror: a tool for visualizing high-throughput microbial community data

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Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

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The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

(2012) Daniel McDonald et al.   GigaScience

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

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The pros and cons of phytoestrogens

(2010) Heather B. Patisaul et al.   FRONTIERS IN NEUROENDOCRINOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Human oral, gut, and plaque microbiota in patients with atherosclerosis

(2010) O. Koren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Effect of Diet on the Human Gut Microbiome: A Metagenomic Analysis in Humanized Gnotobiotic Mice

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ProteoWizard: open source software for rapid proteomics tools development

(2008) Darren Kessner et al.   BIOINFORMATICS