NPCMF: Nearest Profile-based Collaborative Matrix Factorization method for predicting miRNA-disease associations

The computational prediction of drug-disease interactions using the dual-network L2,1-CMF method

(2019) Zhen Cui et al.   BMC BIOINFORMATICS

BNPMDA: Bipartite Network Projection for MiRNA–Disease Association prediction

(2018) Xing Chen et al.   BIOINFORMATICS

MDHGI: Matrix Decomposition and Heterogeneous Graph Inference for miRNA-disease association prediction

(2018) Xing Chen et al.   PLoS Computational Biology

Drug-Target Interaction Prediction with Graph Regularized Matrix Factorization

(2017) Ali Ezzat et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

HAMDA: Hybrid Approach for MiRNA-Disease Association prediction

(2017) Xing Chen et al.   JOURNAL OF BIOMEDICAL INFORMATICS

DRMDA: deep representations-based miRNA-disease association prediction

(2017) Xing Chen et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

MKRMDA: multiple kernel learning-based Kronecker regularized least squares for MiRNA–disease association prediction

(2017) Xing Chen et al.   Journal of Translational Medicine

RKNNMDA: Ranking-based KNN for MiRNA-Disease Association prediction

(2017) Xing Chen et al.   RNA Biology

LRSSLMDA: Laplacian Regularized Sparse Subspace Learning for MiRNA-Disease Association prediction

(2017) Xing Chen et al.   PLoS Computational Biology

PBMDA: A novel and effective path-based computational model for miRNA-disease association prediction

(2017) Zhu-Hong You et al.   PLoS Computational Biology

WBSMDA: Within and Between Score for MiRNA-Disease Association prediction

(2016) Xing Chen et al.   Scientific Reports

Prediction of miRNA-disease associations with a vector space model

(2016) Claude Pasquier et al.   Scientific Reports

Semi-supervised learning for potential human microRNA-disease associations inference

(2014) Xing Chen et al.   Scientific Reports

Protein-driven inference of miRNA-disease associations

(2013) S. Mork et al.   BIOINFORMATICS

Walking the interactome to identify human miRNA-disease associations through the functional link between miRNA targets and disease genes

(2013) Hongbo Shi et al.   BMC Systems Biology

Similarity-based machine learning methods for predicting drug–target interactions: a brief review

(2013) Hao Ding et al.   BRIEFINGS IN BIOINFORMATICS

miR-211 promotes the progression of head and neck carcinomas by targeting TGFβRII

(2013) Ting-Hui Chu et al.   CANCER LETTERS

Prediction of microRNAs Associated with Human Diseases Based on Weighted k Most Similar Neighbors

(2013) Ping Xuan et al.   PLoS One

First Report of Circulating MicroRNAs in Tumour Necrosis Factor Receptor-Associated Periodic Syndrome (TRAPS)

(2013) Orso Maria Lucherini et al.   PLoS One

miR-17 92 miRNA cluster promotes kidney cyst growth in polycystic kidney disease

(2013) V. Patel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Overexpression of miR-196b and HOXA10 characterize a poor-prognosis gastric cancer subtype

(2013) Jae Yun Lim   WORLD JOURNAL OF GASTROENTEROLOGY

miR-137 inhibits the proliferation of lung cancer cells by targeting Cdc42 and Cdk6

(2012) Xiaolan Zhu et al.   FEBS LETTERS

RWRMDA: predicting novel human microRNA–disease associations

(2012) Xing Chen et al.   Molecular BioSystems

Gaussian interaction profile kernels for predicting drug–target interaction

(2011) Twan van Laarhoven et al.   BIOINFORMATICS

miR-340 inhibition of breast cancer cell migration and invasion through targeting of oncoprotein c-Met

(2011) Zheng-sheng Wu et al.   CANCER

Genomic Loss of miR-486 Regulates Tumor Progression and the OLFM4 Antiapoptotic Factor in Gastric Cancer

(2011) H.-K. Oh et al.   CLINICAL CANCER RESEARCH

Inferring the human microRNA functional similarity and functional network based on microRNA-associated diseases

(2010) Dong Wang et al.   BIOINFORMATICS

Prioritization of disease microRNAs through a human phenome-microRNAome network

(2010) Qinghua Jiang et al.   BMC Systems Biology

Integrative Genomic Profiling of Human Prostate Cancer

(2010) Barry S. Taylor et al.   CANCER CELL

Human colon cancer profiles show differential microRNA expression depending on mismatch repair status and are characteristic of undifferentiated proliferative states

(2009) Aaron L Sarver et al.   BMC CANCER

Tumor Clustering Using Nonnegative Matrix Factorization With Gene Selection

(2009) Chun-Hou Zheng et al.   IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE

Prediction of drug-target interaction networks from the integration of chemical and genomic spaces

(2008) Y. Yamanishi et al.   BIOINFORMATICS

MicroRNA target site polymorphisms and human disease

(2008) Praveen Sethupathy et al.   TRENDS IN GENETICS