Transcriptomic and proteomic responses to very low CO2 suggest multiple carbon concentrating mechanisms in Nannochloropsis oceanica

The genetics of convergent evolution: insights from plant photosynthesis

(2019) Karolina Heyduk et al.   NATURE REVIEWS GENETICS

Knockdown of carbonate anhydrase elevates Nannochloropsis productivity at high CO2 level

(2019) Li Wei et al.   METABOLIC ENGINEERING

Proteome and transcriptome analyses reveal key molecular differences between quality parameters of commercial-ripe and tree-ripe fig (Ficus carica L.)

(2019) Yuanyuan Cui et al.   BMC PLANT BIOLOGY

The intracellular distribution of inorganic carbon fixing enzymes does not support the presence of a C4 pathway in the diatom Phaeodactylum tricornutum

(2018) Daniela Ewe et al.   PHOTOSYNTHESIS RESEARCH

Advanced genetic tools enable synthetic biology in the oleaginous microalgae Nannochloropsis sp.

(2018) Eric Poliner et al.   PLANT CELL REPORTS

Enhancing carbon capture and lipid accumulation by genetic carbonic anhydrase in microalgae

(2018) Way-Rong Lin et al.   Journal of the Taiwan Institute of Chemical Engineers

Biosynthesis of Triacylglycerol Molecules with Tailored PUFA Profile in Industrial Microalgae

(2018) Yi Xin et al.   Molecular Plant

Diversity of CO2-concentrating mechanisms and responses to CO2 concentration in marine and freshwater diatoms

(2017) Romain Clement et al.   JOURNAL OF EXPERIMENTAL BOTANY

Molecular aspects of the biophysical CO2-concentrating mechanism and its regulation in marine diatoms

(2017) Yoshinori Tsuji et al.   JOURNAL OF EXPERIMENTAL BOTANY

Producing Designer Oils in Industrial Microalgae by Rational Modulation of Co-evolving Type-2 Diacylglycerol Acyltransferases

(2017) Yi Xin et al.   Molecular Plant

The Chlamydomonas CO2 -concentrating mechanism and its potential for engineering photosynthesis in plants

(2017) Luke C. M. Mackinder   NEW PHYTOLOGIST

The carbonic anhydrase CAH1 is an essential component of the carbon-concentrating mechanism inNannochloropsis oceanica

(2017) Christopher W. Gee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cyanobacterial CO 2 -concentrating mechanism components: function and prospects for plant metabolic engineering

(2016) Benedict M Long et al.   CURRENT OPINION IN PLANT BIOLOGY

The physiology and genetics of CO 2 concentrating mechanisms in model diatoms

(2016) Brian M Hopkinson et al.   CURRENT OPINION IN PLANT BIOLOGY

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

(2016) Stefka Tyanova et al.   Nature Protocols

Mitochondrial gamma carbonic anhydrases are required for complex I assembly and plant reproductive development

(2016) Steffanie Fromm et al.   NEW PHYTOLOGIST

Genome editing of model oleaginous microalgaeNannochloropsisspp. by CRISPR/Cas9

(2016) Qintao Wang et al.   PLANT JOURNAL

Effects of overexpression of a bHLH transcription factor on biomass and lipid production in Nannochloropsis salina

(2015) Nam Kyu Kang et al.   Biotechnology for Biofuels

The nature of the CO2-concentrating mechanisms in a marine diatom,Thalassiosira pseudonana

(2015) Romain Clement et al.   NEW PHYTOLOGIST

Functional characterization of mutants affected in the carbonic anhydrase domain of the respiratory complex I inArabidopsis thaliana

(2015) Débora Soto et al.   PLANT JOURNAL

Phosphoenolpyruvate Carboxylase in Arabidopsis Leaves Plays a Crucial Role in Carbon and Nitrogen Metabolism

(2015) Jianghua Shi et al.   PLANT PHYSIOLOGY

Molecular mechanisms for photosynthetic carbon partitioning into storage neutral lipids in Nannochloropsis oceanica under nitrogen-depletion conditions

(2015) Jing Jia et al.   Algal Research-Biomass Biofuels and Bioproducts

Choreography of Transcriptomes and Lipidomes of Nannochloropsis Reveals the Mechanisms of Oil Synthesis in Microalgae

(2014) J. Li et al.   PLANT CELL

Nannochloropsis Genomes Reveal Evolution of Microalgal Oleaginous Traits

(2014) Dongmei Wang et al.   PLoS Genetics

Origins and diversity of eukaryotic CO2-concentrating mechanisms: lessons for the future

(2013) Moritz Meyer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Short- and long-term conditioning of a temperate marine diatom community to acidification and warming

(2013) A. O. Tatters et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The physiology of ex vitro pineapple (Ananas comosus L. Merr. var MD-2) as CAM or C3 is regulated by the environmental conditions: proteomic and transcriptomic profiles

(2013) C. Aragón et al.   PLANT CELL REPORTS

Responses of Nannochloropsis oceanica IMET1 to Long-Term Nitrogen Starvation and Recovery

(2013) H.-P. Dong et al.   PLANT PHYSIOLOGY

SLC4 family transporters in a marine diatom directly pump bicarbonate from seawater

(2013) K. Nakajima et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Effects of inorganic carbon concentration on carbon formation, nitrate utilization, biomass and oil accumulation of Nannochloropsis oculata CS 179

(2012) Qiang Lin et al.   BIORESOURCE TECHNOLOGY

Photorespiration has a dual origin and manifold links to central metabolism

(2012) Hermann Bauwe et al.   CURRENT OPINION IN PLANT BIOLOGY

Photosynthetic control of electron transport and the regulation of gene expression

(2012) Christine H. Foyer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome-Wide Changes in Chlamydomonas reinhardtii Gene Expression Regulated by Carbon Dioxide and the CO2-Concentrating Mechanism Regulator CIA5/CCM1

(2012) W. Fang et al.   PLANT CELL

Activation of the Carbon Concentrating Mechanism by CO2 Deprivation Coincides with Massive Transcriptional Restructuring in Chlamydomonas reinhardtii

(2012) A. J. Brueggeman et al.   PLANT CELL

Bacterial- and plant-type phosphoenolpyruvate carboxylase isozymes from developing castor oil seeds interact in vivo and associate with the surface of mitochondria

(2012) Joonho Park et al.   PLANT JOURNAL

A Global Pattern of Thermal Adaptation in Marine Phytoplankton

(2012) M. K. Thomas et al.   SCIENCE

Development of suitable photobioreactors for CO2 sequestration addressing global warming using green algae and cyanobacteria

(2011) Kanhaiya Kumar et al.   BIORESOURCE TECHNOLOGY

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Evolution and metabolic significance of the urea cycle in photosynthetic diatoms

(2011) Andrew E. Allen et al.   NATURE

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Conserved and Divergent Rhythms of Crassulacean Acid Metabolism-Related and Core Clock Gene Expression in the Cactus Opuntia ficus-indica

(2011) I. Mallona et al.   PLANT PHYSIOLOGY

Carbon Concentrating Mechanisms in Eukaryotic Marine Phytoplankton

(2010) John R. Reinfelder   Annual Review of Marine Science

Potential carbon dioxide fixation by industrially important microalgae

(2010) Eduardo Bittencourt Sydney et al.   BIORESOURCE TECHNOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

(2010) Gurvan Michel et al.   NEW PHYTOLOGIST

Internal Architecture of Mitochondrial Complex I from Arabidopsis thaliana

(2010) J. Klodmann et al.   PLANT CELL

Marine biodiversity, ecosystem functioning, and carbon cycles

(2010) G. Beaugrand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Photorespiratory Metabolism: Genes, Mutants, Energetics, and Redox Signaling

(2009) Christine H. Foyer et al.   Annual Review of Plant Biology

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Correlation of mRNA and protein in complex biological samples

(2009) Tobias Maier et al.   FEBS LETTERS

Carbon-concentrating mechanism in a green alga,Chlamydomonas reinhardtii, revealed by transcriptome analyses

(2009) Takashi Yamano et al.   JOURNAL OF BASIC MICROBIOLOGY

Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references

(2009) S. Guenin et al.   JOURNAL OF EXPERIMENTAL BOTANY

Metabolic evolution of energy-conserving pathways for succinate production in Escherichia coli

(2009) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chlorophyll Fluorescence: A Probe of Photosynthesis In Vivo

(2008) Neil R. Baker   Annual Review of Plant Biology

HECTAR: A method to predict subcellular targeting in heterokonts

(2008) Bernhard Gschloessl et al.   BMC BIOINFORMATICS

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Photobioreactors for mass cultivation of algae

(2007) C.U. Ugwu et al.   BIORESOURCE TECHNOLOGY