Variations in phyllosphere microbial community along with the development of angular leaf-spot of cucumber

Responses of bacterial community to dibutyl phthalate pollution in a soil-vegetable ecosystem

(2018) Xiao Kong et al.   JOURNAL OF HAZARDOUS MATERIALS

Pumpkin powdery mildew disease severity influences the fungal diversity of the phyllosphere

(2018) Zhuo Zhang et al.   PeerJ

Dibutyl phthalate contamination remolded the fungal community in agro-environmental system

(2018) Xiao Kong et al.   CHEMOSPHERE

Biodiversity and species competition regulate the resilience of microbial biofilm community

(2017) Kai Feng et al.   MOLECULAR ECOLOGY

Biostimulant Action of Protein Hydrolysates: Unraveling Their Effects on Plant Physiology and Microbiome

(2017) Giuseppe Colla et al.   Frontiers in Plant Science

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

The microbiome of the leaf surface of Arabidopsis protects against a fungal pathogen

(2016) Unyarat Ritpitakphong et al.   NEW PHYTOLOGIST

Long-Term Oil Contamination Alters the Molecular Ecological Networks of Soil Microbial Functional Genes

(2016) Yuting Liang et al.   Frontiers in Microbiology

Influences of Plant Species, Season and Location on Leaf Endophytic Bacterial Communities of Non-Cultivated Plants

(2016) Tao Ding et al.   PLoS One

Network succession reveals the importance of competition in response to emulsified vegetable oil amendment for uranium bioremediation

(2015) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

Seasonal Community Succession of the Phyllosphere Microbiome

(2015) Julia K. Copeland et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Pivotal roles of phyllosphere microorganisms at the interface between plant functioning and atmospheric trace gas dynamics

(2015) Françoise Bringel et al.   Frontiers in Microbiology

Induced Systemic Resistance by Beneficial Microbes

(2014) Corné M.J. Pieterse et al.   Annual Review of Phytopathology

Phyllosphere Bacterial Community of Floating Macrophytes in Paddy Soil Environments as Revealed by Illumina High-Throughput Sequencing

(2014) Wan-Ying Xie et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Towards a holistic understanding of the beneficial interactions across thePopulusmicrobiome

(2014) Stéphane Hacquard et al.   NEW PHYTOLOGIST

Southern leaf blight disease severity is correlated with decreased maize leaf epiphytic bacterial species richness and the phyllosphere bacterial diversity decline is enhanced by nitrogen fertilization

(2014) Heather C. Manching et al.   Frontiers in Plant Science

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

SalmonellaInteractions with Plants and Their Associated Microbiota

(2013) Maria T. Brandl et al.   PHYTOPATHOLOGY

Bespoke microbiome therapy to manage plant diseases

(2013) Murali Gopal et al.   Frontiers in Microbiology

Next-Generation Bio-Products Sowing the Seeds of Success for Sustainable Agriculture

(2013) Gabriele Berg et al.   Agronomy-Basel

Molecular ecological network analyses

(2012) Ye Deng et al.   BMC BIOINFORMATICS

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Leaf microbiota in an agroecosystem: spatiotemporal variation in bacterial community composition on field-grown lettuce

(2012) Gurdeep Rastogi et al.   ISME Journal

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Microbial life in the phyllosphere

(2012) Julia A. Vorholt   NATURE REVIEWS MICROBIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

(2012) Matthew G. Bakker et al.   PLANT AND SOIL

Methylobacterium-Induced Endophyte Community Changes Correspond with Protection of Plants against Pathogen Attack

(2012) Pavlo Ardanov et al.   PLoS One

Diversity of Interaction Types and Ecological Community Stability

(2012) A. Mougi et al.   SCIENCE

Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System

(2011) Gerd Innerebner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Restructuring of Endophytic Bacterial Communities in Grapevine Yellows-Diseased and Recovered Vitis vinifera L. Plants

(2011) Daniela Bulgari et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Climate change feedbacks to microbial decomposition in boreal soils

(2011) Steven D. Allison et al.   Fungal Ecology

Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies

(2011) Yong Kong   GENOMICS

Huanglongbing alters the structure and functional diversity of microbial communities associated with citrus rhizosphere

(2011) Pankaj Trivedi et al.   ISME Journal

Microbial Communities Associated with Potato Common Scab-Suppressive Soil Determined by Pyrosequencing Analyses

(2011) Noah Rosenzweig et al.   PLANT DISEASE

Diversity and biogeography of selected phyllosphere bacteria with special emphasis on Methylobacterium spp.

(2011) S. Wellner et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Phylogenetic Molecular Ecological Network of Soil Microbial Communities in Response to Elevated CO2

(2011) J. Zhou et al.   mBio

The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves

(2010) Amanda J. Redford et al.   ENVIRONMENTAL MICROBIOLOGY

Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere

(2010) Claudia Knief et al.   ISME Journal

Microbial community on healthy and diseased leaves of an invasive plant Eupatorium adenophorum in Southwest China

(2010) Zhen-Xin Zhou et al.   JOURNAL OF MICROBIOLOGY

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Bacterial Succession on the Leaf Surface: A Novel System for Studying Successional Dynamics

(2009) Amanda J. Redford et al.   MICROBIAL ECOLOGY

Fungal endophytes: diversity and functional roles

(2009) R. J. Rodriguez et al.   NEW PHYTOLOGIST

Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

(2009) N. Delmotte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial communities and their relevance for ecosystem models: Decomposition as a case study

(2009) Krista L. McGuire et al.   SOIL BIOLOGY & BIOCHEMISTRY

Pathogens promote plant diversity through a compensatory response

(2008) Devon J. Bradley et al.   ECOLOGY LETTERS

Phyllosphere microbiology with special reference to diversity and plant genotype

(2008) J.M. Whipps et al.   JOURNAL OF APPLIED MICROBIOLOGY