Genes, geology and germs: gut microbiota across a primate hybrid zone are explained by site soil properties, not host species

Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes

(2018) Katherine R. Amato et al.   ISME Journal

Terrestriality and bacterial transfer: a comparative study of gut microbiomes in sympatric Malagasy mammals

(2018) Amanda C. Perofsky et al.   ISME Journal

Environment dominates over host genetics in shaping human gut microbiota

(2018) Daphna Rothschild et al.   NATURE

Climate and Land Cover Analysis Suggest No Strong Ecological Barriers to Gene Flow in a Natural Baboon Hybrid Zone

(2017) Tim L. Wango et al.   INTERNATIONAL JOURNAL OF PRIMATOLOGY

The microbiota of diapause: How host-microbe associations are formed after dormancy in an aquatic crustacean

(2017) Alexandra A. Mushegian et al.   JOURNAL OF ANIMAL ECOLOGY

Host Genotype and Gut Microbiome Modulate Insulin Secretion and Diet-Induced Metabolic Phenotypes

(2017) Julia H. Kreznar et al.   Cell Reports

Linking the Gut Microbial Ecosystem with the Environment: Does Gut Health Depend on Where We Live?

(2017) Nishat Tasnim et al.   Frontiers in Microbiology

Increased weight gain by C-section: Functional significance of the primordial microbiome

(2017) Keith A. Martinez et al.   Science Advances

Gut microbial ecology of lizards: insights into diversity in the wild, effects of captivity, variation across gut regions and transmission

(2016) Kevin D. Kohl et al.   MOLECULAR ECOLOGY

Cospeciation of gut microbiota with hominids

(2016) A. H. Moeller et al.   SCIENCE

Changes in the rumen microbiome and metabolites reveal the effect of host genetics on hybrid crosses

(2016) Zhipeng Li et al.   Environmental Microbiology Reports

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Pika Gut May Select for Rare but Diverse Environmental Bacteria

(2016) Huan Li et al.   Frontiers in Microbiology

Spatial and Temporal Dynamics of Pacific Oyster Hemolymph Microbiota across Multiple Scales

(2016) Ana Lokmer et al.   Frontiers in Microbiology

Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies

(2016) Se Jin Song et al.   mSystems

Dietary input of microbes and host genetic variation shape among-population differences in stickleback gut microbiota

(2015) Chris CR Smith et al.   ISME Journal

Kinship, inbreeding and fine-scale spatial structure influence gut microbiota in a hindgut-fermenting tortoise

(2015) Michael L. Yuan et al.   MOLECULAR ECOLOGY

Phylogenetic and ecological factors impact the gut microbiota of two Neotropical primate species

(2015) Katherine R. Amato et al.   OECOLOGIA

Analysis of intestinal microbiota in hybrid house mice reveals evolutionary divergence in a vertebrate hologenome

(2015) Jun Wang et al.   Nature Communications

Shifts in the gut microbiome observed in wildlife faecal samples exposed to natural weather conditions: lessons from time-series analyses using next-generation sequencing for application in field studies

(2015) Sebastian Menke et al.   Methods in Ecology and Evolution

Social networks predict gut microbiome composition in wild baboons

(2015) Jenny Tung et al.   eLife

Ecotypes of an ecologically dominant prairie grass (Andropogon gerardii) exhibit genetic divergence across the U.S. Midwest grasslands' environmental gradient

(2014) Miranda M. Gray et al.   MOLECULAR ECOLOGY

The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification

(2014) T.B.K. Reddy et al.   NUCLEIC ACIDS RESEARCH

Spatial Ecology of Bacteria at the Microscale in Soil

(2014) Xavier Raynaud et al.   PLoS One

Longitudinal analysis of microbial interaction between humans and the indoor environment

(2014) S. Lax et al.   SCIENCE

Fecal microbiomes of non-human primates in Western Uganda reveal species-specific communities largely resistant to habitat perturbation

(2013) Aleia I. McCord et al.   AMERICAN JOURNAL OF PRIMATOLOGY

DISENTANGLING THE EFFECTS OF GEOGRAPHIC AND ECOLOGICAL ISOLATION ON GENETIC DIFFERENTIATION

(2013) Gideon S. Bradburd et al.   EVOLUTION

The importance of species sorting differs between habitat generalists and specialists in bacterial communities

(2013) Anna J. Székely et al.   FEMS MICROBIOLOGY ECOLOGY

Sympatric chimpanzees and gorillas harbor convergent gut microbial communities

(2013) A. H. Moeller et al.   GENOME RESEARCH

Habitat degradation impacts black howler monkey (Alouatta pigra) gastrointestinal microbiomes

(2013) Katherine R Amato et al.   ISME Journal

The role of biogeography in shaping diversity of the intestinal microbiota in house mice

(2013) Miriam Linnenbrink et al.   MOLECULAR ECOLOGY

The Hologenomic Basis of Speciation: Gut Bacteria Cause Hybrid Lethality in the Genus Nasonia

(2013) R. M. Brucker et al.   SCIENCE

Dismantling the Mantel tests

(2013) Gilles Guillot et al.   Methods in Ecology and Evolution

Ecological drift and local exposures drive enteric bacterial community differences within species of Galápagos iguanas

(2012) EMILY W. LANKAU et al.   MOLECULAR ECOLOGY

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

The Application of Ecological Theory Toward an Understanding of the Human Microbiome

(2012) E. K. Costello et al.   SCIENCE

Beyond the Venn diagram: the hunt for a core microbiome

(2011) Ashley Shade et al.   ENVIRONMENTAL MICROBIOLOGY

Genetic structure in a dynamic baboon hybrid zone corroborates behavioural observations in a hybrid population

(2011) M. J. E. CHARPENTIER et al.   MOLECULAR ECOLOGY

coancestry: a program for simulating, estimating and analysing relatedness and inbreeding coefficients

(2010) JINLIANG WANG   Molecular Ecology Resources

Spatial Inference of Admixture Proportions and Secondary Contact Zones

(2009) E. Durand et al.   MOLECULAR BIOLOGY AND EVOLUTION

Host density and human activities mediate increased parasite prevalence and richness in primates threatened by habitat loss and fragmentation

(2008) David N. M. Mbora et al.   JOURNAL OF ANIMAL ECOLOGY