High-throughput sequencing reveals microRNAs in response to heat stress in the head kidney of rainbow trout (Oncorhynchus mykiss)

MicroRNAs in durum wheat seedlings under chronic and short-term nitrogen stress

(2018) Diana L. Zuluaga et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Analysis of miRNA-seq in the liver of common carp (Cyprinus carpio L.) in response to different environmental temperatures

(2018) JunLong Sun et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Identification of drought-responsive microRNAs in tomato using high-throughput sequencing

(2017) Minmin Liu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Differential expression of microRNA related to irritable bowel syndrome in a rabbit model

(2017) Qin Qin Yang et al.   Journal of Digestive Diseases

The expression profiles of miRNA–mRNA of early response in genetically improved farmed tilapia (Oreochromis niloticus) liver by acute heat stress

(2017) Jun Qiang et al.   Scientific Reports

Formaldehyde induces toxicity in mouse bone marrow and hematopoietic stem/progenitor cells and enhances benzene-induced adverse effects

(2016) Chenxi Wei et al.   ARCHIVES OF TOXICOLOGY

Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing

(2016) Amelie Juanchich et al.   BMC GENOMICS

HSP90AB1: Helping the good and the bad

(2016) Michael Haase et al.   GENE

miR-150-5p and miR-133a suppress glioma cell proliferation and migration through targeting membrane-type-1 matrix metalloproteinase

(2016) Moustafa Sakr et al.   GENE

The zebrafish miR-462/miR-731 cluster is induced under hypoxic stress via hypoxia-inducible factor 1α and functions in cellular adaptations

(2015) Chun-Xiao Huang et al.   FASEB JOURNAL

Effects of heat stress on respiratory burst, oxidative damage and SERPINH1 (HSP47) mRNA expression in rainbow trout Oncorhynchus mykiss

(2015) Yanni Wang et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Short Communication Effect of heat stress on heat-shock protein (Hsp60) mRNA expression in rainbow trout Oncorhynchus mykiss

(2015) H.N. Shi et al.   GENETICS AND MOLECULAR RESEARCH

Identification of MicroRNAs in Zebrafish Spermatozoa

(2015) Kun-Tong Jia et al.   Zebrafish

Specific microRNAs Regulate Heat Stress Responses in Caenorhabditis elegans

(2015) Camilla Nehammer et al.   Scientific Reports

High throughput sequencing of two celery varieties small RNAs identifies microRNAs involved in temperature stress response

(2014) Meng-Yao Li et al.   BMC GENOMICS

Thermal plasticity of the miRNA transcriptome during Senegalese sole development

(2014) Catarina Campos et al.   BMC GENOMICS

MicroRNA in Teleost Fish

(2014) T. T. Bizuayehu et al.   Genome Biology and Evolution

Discovery and characterization of miRNA genes in atlantic salmon (Salmo salar) by use of a deep sequencing approach

(2013) Rune Andreassen et al.   BMC GENOMICS

A heat shock protein 90 β isoform involved in immune response to bacteria challenge and heat shock from Miichthys miiuy

(2013) Tao Wei et al.   FISH & SHELLFISH IMMUNOLOGY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments

(2012) Ming Wen et al.   BMC BIOINFORMATICS

Role of microRNAs and other sRNAs of plants in their changing environments

(2012) Katarzyna Kruszka et al.   JOURNAL OF PLANT PHYSIOLOGY

High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

(2012) Fengde Wang et al.   MOLECULAR GENETICS AND GENOMICS

A Combined Approach of High-Throughput Sequencing and Degradome Analysis Reveals Tissue Specific Expression of MicroRNAs and Their Targets in Cucumber

(2012) Weihua Mao et al.   PLoS One

Temperature during embryonic development has persistent effects on thermal acclimation capacity in zebrafish

(2012) G. R. Scott et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Thermal acclimation in Antarctic fish: transcriptomic profiling of metabolic pathways

(2011) Heidrun Sigrid Windisch et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Role of miRNAs and siRNAs in biotic and abiotic stress responses of plants

(2011) Basel Khraiwesh et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

MicroRNA-mediated gene regulation plays a minor role in the transcriptomic plasticity of cold-acclimated Zebrafish brain tissue

(2011) Ruolin Yang et al.   BMC GENOMICS

A first generation integrated map of the rainbow trout genome

(2011) Yniv Palti et al.   BMC GENOMICS

The immune response of turbot, Scophthalmus maximus (L.), skin to high water temperature

(2011) Z-H Huang et al.   JOURNAL OF FISH DISEASES

Cutting Edge: MicroRNA-181 Promotes Human NK Cell Development by Regulating Notch Signaling

(2011) F. Cichocki et al.   JOURNAL OF IMMUNOLOGY

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

High-Throughput Sequencing, Characterization and Detection of New and Conserved Cucumber miRNAs

(2011) Germán Martínez et al.   PLoS One

Transcriptional responses to thermal acclimation in the eurythermal fish Gillichthys mirabilis (Cooper 1864)

(2010) Cheryl A. Logan et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

Heat-shock responsive genes identified and validated in Atlantic cod (Gadus morhua) liver, head kidney and skeletal muscle using genomic techniques

(2010) Tiago S Hori et al.   BMC GENOMICS

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

A MicroRNA Repertoire for Functional Genome Research in Rainbow Trout (Oncorhynchus mykiss)

(2009) Mohamed Salem et al.   MARINE BIOTECHNOLOGY

Agonistic encounters and cellular angst: social interactions induce heat shock proteins in juvenile salmonid fish

(2009) S. Currie et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Cloning and characterization of microRNAs from rainbow trout (Oncorhynchus mykiss): Their expression during early embryonic development

(2008) Raghuveer K Ramachandra et al.   BMC DEVELOPMENTAL BIOLOGY

Genomic Organization of Zebrafish microRNAs

(2008) Elizabeth J Thatcher et al.   BMC GENOMICS

Cloning of cytoplasmic heat shock protein 90 (FcHSP90) from Fenneropenaeus chinensis and its expression response to heat shock and hypoxia

(2008) Fuhua Li et al.   CELL STRESS & CHAPERONES

Sequence Relationships among C. elegans, D. melanogaster and Human microRNAs Highlight the Extensive Conservation of microRNAs in Biology

(2008) Carolina Ibáñez-Ventoso et al.   PLoS One

Heat shock protein (HSP70) RNA expression differs among rainbow trout (Oncorhynchus mykiss) clonal lines

(2007) Pilar Heredia-Middleton et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY