Characterization of an extensive rainbow trout miRNA transcriptome by next generation sequencing

Spermatogonial Stem Cell Quest: nanos2, Marker of a Subpopulation of Undifferentiated A Spermatogonia in Trout Testis1

(2014) Johanna Bellaiche et al.   BIOLOGY OF REPRODUCTION

Metabolic consequences of microRNA-122 inhibition in rainbow trout, Oncorhynchus mykiss

(2014) Jan A Mennigen et al.   BMC GENOMICS

miRNA, siRNA, piRNA: Knowns of the unknown

(2014) Claudia Kutter et al.   RNA Biology

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

Identification of Differentially Expressed miRNAs and Their Potential Targets During Fish Ovarian Development1

(2013) Amélie Juanchich et al.   BIOLOGY OF REPRODUCTION

Discovery and characterization of miRNA genes in atlantic salmon (Salmo salar) by use of a deep sequencing approach

(2013) Rune Andreassen et al.   BMC GENOMICS

MicroRNA-146 represses endothelial activation by inhibiting pro-inflammatory pathways

(2013) Henry S. Cheng et al.   EMBO Molecular Medicine

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Sequencing and Characterisation of an Extensive Atlantic Salmon (Salmo salar L.) MicroRNA Repertoire

(2013) Michaël Bekaert et al.   PLoS One

Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression

(2012) Guan-Zheng Luo et al.   BMC GENOMICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sex-Biased miRNA Expression in Atlantic Halibut (Hippoglossus hippoglossus) Brain and Gonads

(2012) T.T. Bizuayehu et al.   Sexual Development

Manipulation of Estrogen Synthesis Alters MIR202* Expression in Embryonic Chicken Gonads1

(2011) Stephanie C. Bannister et al.   BIOLOGY OF REPRODUCTION

miR-196 regulates axial patterning and pectoral appendage initiation

(2011) Xinjun He et al.   DEVELOPMENTAL BIOLOGY

Discovery and characterization of medaka miRNA genes by next generation sequencing platform

(2010) Sung-Chou Li et al.   BMC GENOMICS

Evolution of MicroRNAs and the Diversification of Species

(2010) Yong-Hwee E. Loh et al.   Genome Biology and Evolution

MicroRNAs and metazoan macroevolution: insights into canalization, complexity, and the Cambrian explosion

(2009) Kevin J. Peterson et al.   BIOESSAYS

Sexually Dimorphic MicroRNA Expression During Chicken Embryonic Gonadal Development1

(2009) Stephanie C. Bannister et al.   BIOLOGY OF REPRODUCTION

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Parallel DNA pyrosequencing unveils new zebrafish microRNAs

(2009) Ana R Soares et al.   BMC GENOMICS

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

Abundant and dynamically expressed miRNAs, piRNAs, and other small RNAs in the vertebrate Xenopus tropicalis

(2009) J. Armisen et al.   GENOME RESEARCH

A MicroRNA Repertoire for Functional Genome Research in Rainbow Trout (Oncorhynchus mykiss)

(2009) Mohamed Salem et al.   MARINE BIOTECHNOLOGY

Estradiol downregulates miR-21 expression and increases miR-21 target gene expression in MCF-7 breast cancer cells

(2009) Nalinie S. Wickramasinghe et al.   NUCLEIC ACIDS RESEARCH

Cloning and characterization of microRNAs from rainbow trout (Oncorhynchus mykiss): Their expression during early embryonic development

(2008) Raghuveer K Ramachandra et al.   BMC DEVELOPMENTAL BIOLOGY

MicroRNA-21 contributes to myocardial disease by stimulating MAP kinase signalling in fibroblasts

(2008) Thomas Thum et al.   NATURE

GtRNAdb: a database of transfer RNA genes detected in genomic sequence

(2008) P. P. Chan et al.   NUCLEIC ACIDS RESEARCH

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

miR2Disease: a manually curated database for microRNA deregulation in human disease

(2008) Q. Jiang et al.   NUCLEIC ACIDS RESEARCH