Somatic expression of piRNA and associated machinery in the mouse identifies short, tissue-specific piRNA

Nm-seq maps 2′-O-methylation sites in human mRNA with base precision

(2017) Qing Dai et al.   NATURE METHODS

piRNAs and Their Functions in the Brain

(2016) Lingjun Zuo et al.   INTERNATIONAL JOURNAL OF HUMAN GENETICS

Roles for small noncoding RNAs in silencing of retrotransposons in the mammalian brain

(2016) Sayan Nandi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of piRNAs across postnatal development in mouse brain

(2016) Yanal Ghosheh et al.   Scientific Reports

piRNA cluster database: a web resource for piRNA producing loci

(2015) David Rosenkranz   NUCLEIC ACIDS RESEARCH

MIWI2 and MILI Have Differential Effects on piRNA Biogenesis and DNA Methylation

(2015) Sergei A. Manakov et al.   Cell Reports

Discovery and Characterization of piRNAs in the Human Fetal Ovary

(2015) Zev Williams et al.   Cell Reports

Piwi-like 1 and 4 gene transcript levels are associated with clinicopathological parameters in renal cell carcinomas

(2014) Omar Al-Janabi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data

(2014) Yanxiao Zhang et al.   BIOINFORMATICS

piRNAQuest: searching the piRNAome for silencers

(2014) Arijita Sarkar et al.   BMC GENOMICS

piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells

(2014) D. Pezic et al.   GENES & DEVELOPMENT

A Novel Class of Somatic Small RNAs Similar to Germ Cell Pachytene PIWI-interacting Small RNAs

(2014) Nicole Ortogero et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

PIWI proteins and PIWI-interacting RNAs in the soma

(2014) Robert J. Ross et al.   NATURE

PIWI Proteins Are Dispensable for Mouse Somatic Development and Reprogramming of Fibroblasts into Pluripotent Stem Cells

(2014) Ee-Chun Cheng et al.   PLoS One

Small RNA profiling and characterization of piRNA clusters in the adult testes of the common marmoset, a model primate

(2014) Takamasa Hirano et al.   RNA

piRBase: a web resource assisting piRNA functional study

(2014) Peng Zhang et al.   Database-The Journal of Biological Databases and Curation

Untangling the web: The diverse functions of the PIWI/piRNA pathway

(2013) Sneha Ramesh Mani et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT

Proviral Silencing in Embryonic Cells Is Regulated by Yin Yang 1

(2013) Sharon Schlesinger et al.   Cell Reports

Software for Computing and Annotating Genomic Ranges

(2013) Michael Lawrence et al.   PLoS Computational Biology

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

A Role for Neuronal piRNAs in the Epigenetic Control of Memory-Related Synaptic Plasticity

(2012) Priyamvada Rajasethupathy et al.   CELL

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Novel Small Noncoding RNAs in Mouse Spermatozoa, Zygotes and Early Embryos

(2012) Mitsuoki Kawano et al.   PLoS One

Concise Review: The Piwi-piRNA Axis: Pivotal Beyond Transposon Silencing

(2012) Shiva Bamezai et al.   STEM CELLS

PIWI Expression and Function in Cancer

(2012) Ryusuke Suzuki et al.   Frontiers in Genetics

The characterisation of piRNA-related 19mers in the mouse

(2011) Harald M Oey et al.   BMC GENOMICS

Widespread expression of piRNA-like molecules in somatic tissues

(2011) Zheng Yan et al.   NUCLEIC ACIDS RESEARCH

Identification of piRNAs in the central nervous system

(2011) E. J. Lee et al.   RNA

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

A sensitive multiplex assay for piRNA expression

(2008) Fuchou Tang et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Mice Deficient for a Small Cluster of Piwi-Interacting RNAs Implicate Piwi-Interacting RNAs in Transposon Control1

(2008) Mingang Xu et al.   BIOLOGY OF REPRODUCTION

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

(2008) R. D. Morin et al.   GENOME RESEARCH