Identification of key genes and its chromosome regions linked to drought responses in leaves across different crops through meta-analysis of RNA-Seq data

RnaSeqSampleSize: real data based sample size estimation for RNA sequencing

(2018) Shilin Zhao et al.   BMC BIOINFORMATICS

No Time to Waste: Transcriptome Study Reveals that Drought Tolerance in Barley May Be Attributed to Stressed-Like Expression Patterns that Exist before the Occurrence of Stress

(2018) Agnieszka Janiak et al.   Frontiers in Plant Science

Overexpression of Glycine soja WRKY20 enhances drought tolerance and improves plant yields under drought stress in transgenic soybean

(2017) Wenfeng Ning et al.   MOLECULAR BREEDING

Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants

(2017) Marcin Pieczynski et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-wide survey of heat shock factors and heat shock protein 70s and their regulatory network under abiotic stresses in Brachypodium distachyon

(2017) Feng Wen et al.   PLoS One

Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus

(2017) Bipin Balan et al.   Frontiers in Plant Science

Transcriptome Analysis of Flowering Time Genes under Drought Stress in Maize Leaves

(2017) Kitae Song et al.   Frontiers in Plant Science

Global Transcriptome Analysis of Combined Abiotic Stress Signaling Genes Unravels Key Players in Oryza sativa L.: An In silico Approach

(2017) Pandiyan Muthuramalingam et al.   Frontiers in Plant Science

Transcriptomic Profiling of the Maize (Zea mays L.) Leaf Response to Abiotic Stresses at the Seedling Stage

(2017) Pengcheng Li et al.   Frontiers in Plant Science

WD40-REPEAT 5afunctions in drought stress tolerance by regulating nitric oxide accumulation in Arabidopsis

(2016) Wen-Cheng Liu et al.   PLANT CELL AND ENVIRONMENT

Meta-analysis and meta-regression of transcriptomic responses to water stress in Arabidopsis

(2016) Joshua S. Rest et al.   PLANT JOURNAL

High-throughput sequencing reveals that pale green lethal disorder in apple (Malus) stimulates stress responses and affects senescence

(2016) Benjamin Orcheski et al.   Tree Genetics & Genomes

Transcriptome Analysis of Sunflower Genotypes with Contrasting Oxidative Stress Tolerance Reveals Individual- and Combined- Biotic and Abiotic Stress Tolerance Mechanisms

(2016) Vemanna S. Ramu et al.   PLoS One

Temporal transcriptome profiling reveals expression partitioning of homeologous genes contributing to heat and drought acclimation in wheat (Triticum aestivum L.)

(2015) Zhenshan Liu et al.   BMC PLANT BIOLOGY

Comprehensive transcript profiling of two grapevine rootstock genotypes contrasting in drought susceptibility links the phenylpropanoid pathway to enhanced tolerance

(2015) Massimiliano Corso et al.   JOURNAL OF EXPERIMENTAL BOTANY

Gene expression regulation in roots under drought

(2015) Agnieszka Janiak et al.   JOURNAL OF EXPERIMENTAL BOTANY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Simultaneous expression of regulatory genes associated with specific drought-adaptive traits improves drought adaptation in peanut

(2015) Vemanna S. Ramu et al.   PLANT BIOTECHNOLOGY JOURNAL

Activated expression of AtWRKY53 negatively regulates drought tolerance by mediating stomatal movement

(2015) Yiding Sun et al.   PLANT CELL REPORTS

Leaf Responses to Mild Drought Stress in Natural Variants of Arabidopsis

(2015) Pieter Clauw et al.   PLANT PHYSIOLOGY

Stress responses in citrus peel: Comparative analysis of host responses to Huanglongbing disease and puffing disorder

(2015) Federico Martinelli et al.   SCIENTIA HORTICULTURAE

H2O2 mediates the crosstalk of brassinosteroid and abscisic acid in tomato responses to heat and oxidative stresses

(2014) Jie Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

NetworkAnalyst - integrative approaches for protein–protein interaction network analysis and visual exploration

(2014) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Proposal of aCitrustranslational genomic approach for early and infield detection of Flavescence dorée in Vitis

(2014) F. Martinelli et al.   PLANT BIOSYSTEMS

Overexpression of Arabidopsis MYB96 confers drought resistance in Camelina sativa via cuticular wax accumulation

(2014) Saet Buyl Lee et al.   PLANT CELL REPORTS

Overexpression of a Calcium-Dependent Protein Kinase Confers Salt and Drought Tolerance in Rice by Preventing Membrane Lipid Peroxidation

(2014) S. Campo et al.   PLANT PHYSIOLOGY

Steep, cheap and deep: an ideotype to optimize water and N acquisition by maize root systems

(2013) Jonathan P. Lynch   ANNALS OF BOTANY

CAMTA 1 regulates drought responses in Arabidopsis thaliana

(2013) Neha Pandey et al.   BMC GENOMICS

Expression of wild soybean WRKY20 in Arabidopsis enhances drought tolerance and regulates ABA signalling

(2013) Xiao Luo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Lipid transfer protein 3 as a target of MYB96 mediates freezing and drought stress in Arabidopsis

(2013) Lin Guo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Abiotic stress responsive rice ASR1 and ASR3 exhibit different tissue-dependent sugar and hormone-sensitivities

(2013) Joungsu Joo et al.   MOLECULES AND CELLS

Gene Regulatory Networks Elucidating Huanglongbing Disease Mechanisms

(2013) Federico Martinelli et al.   PLoS One

The U.S. drought of 2012 in perspective: A call to action

(2013) J.S. Boyer et al.   Global Food Security-Agriculture Policy Economics and Environment

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks

(2012) J. Krasensky et al.   JOURNAL OF EXPERIMENTAL BOTANY

Growth, photosynthesis and H+-ATPase activity in two Jerusalem artichoke varieties under NaCl-induced stress

(2012) Zengrong Huang et al.   PROCESS BIOCHEMISTRY

Thermodynamic linkage between calmodulin domains binding calcium and contiguous sites in the C-terminal tail of CaV1.2

(2011) T. Idil Apak Evans et al.   BIOPHYSICAL CHEMISTRY

China's water crisis needs more than words

(2011) Chaoqing Yu   NATURE

Achievements and Challenges in Understanding Plant Abiotic Stress Responses and Tolerance

(2011) F. Qin et al.   PLANT AND CELL PHYSIOLOGY

Coping with Stresses: Roles of Calcium- and Calcium/Calmodulin-Regulated Gene Expression

(2011) Anireddy S.N. Reddy et al.   PLANT CELL

Time course analysis of ABA and non-ionic osmotic stress-induced changes in water status, chlorophyll fluorescence and osmotic adjustment in Arabidopsis thaliana wild-type (Columbia) and ABA-deficient mutant (aba2)

(2010) Ceyda Ozfidan et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

(2010) G. Zhang et al.   GENOME RESEARCH

Overexpression of the ethylene-responsive factor gene BrERF4 from Brassica rapa increases tolerance to salt and drought in Arabidopsis plants

(2010) Yean Joo Seo et al.   MOLECULES AND CELLS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers

(2009) Woo Yong Lee et al.   PLANT JOURNAL