Identifying Hub Genes for Heat Tolerance in Water Buffalo (Bubalus bubalis) Using Transcriptome Data

Effect of season and breed on physiological and blood parameters in buffaloes

(2018) Liu Shenhe et al.   JOURNAL OF DAIRY RESEARCH

Weighted Gene Co-Expression Network Analysis Reveals Dysregulation of Mitochondrial Oxidative Phosphorylation in Eating Disorders

(2018) Liulin Yang et al.   Genes

MiR-1246 is upregulated and regulates lung cell apoptosis during heat stress in feedlot cattle

(2018) Yu Hu et al.   CELL STRESS & CHAPERONES

Transcriptome analysis identifies activated signaling pathways and regulated ABC transporters and solute carriers after hyperosmotic stress in renal MDCK I cells

(2018) Rune Nørgaard Rasmussen et al.   GENOMICS

The potential effect of temperature-humidity index on productive and reproductive performance of buffaloes with different genotypes under hot conditions

(2017) Mohammed A. F. Nasr   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Transcriptome analysis and identification of significantly differentially expressed genes in Holstein calves subjected to severe thermal stress

(2017) Krishnamoorthy Srikanth et al.   INTERNATIONAL JOURNAL OF BIOMETEOROLOGY

Erratum: Corrigendum: Genomic Selection Improves Heat Tolerance in Dairy Cattle

(2017) J. B. Garner et al.   Scientific Reports

RNA-seq analysis of amygdala tissue reveals characteristic expression profiles in schizophrenia

(2017) X Chang et al.   Translational Psychiatry

Integrated mRNA and microRNA transcriptome analyses reveal regulation of thermal acclimation in Gymnocypris przewalskii: A case study in Tibetan Schizothoracine fish

(2017) Cunfang Zhang et al.   PLoS One

Characterizing Milk Production Related Genes in Holstein Using RNA-seq

(2016) Minseok Seo et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Integrative Analysis of Genomics and Transcriptome Data to Identify Potential Functional Genes of BMDs in Females

(2016) Yuan-Cheng Chen et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Economic feasibility of cooling dry cows across the United States

(2016) F.C. Ferreira et al.   JOURNAL OF DAIRY SCIENCE

Transcriptome analysis reveals that constant heat stress modifies the metabolism and structure of the porcine longissimus dorsi skeletal muscle

(2016) Yue Hao et al.   MOLECULAR GENETICS AND GENOMICS

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

(2016) Mihaela Pertea et al.   Nature Protocols

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Differential Gene Expression in Ovaries of Qira Black Sheep and Hetian Sheep Using RNA-Seq Technique

(2015) Han Ying Chen et al.   PLoS One

RNA-seq analysis of broiler liver transcriptome reveals novel responses to high ambient temperature

(2014) Derrick J Coble et al.   BMC GENOMICS

Differential hypoxic tolerance is mediated by activation of heat shock response and nitric oxide pathway

(2014) Kanika Jain et al.   CELL STRESS & CHAPERONES

Identification and bioinformatics analysis of microRNAs associated with stress and immune response in serum of heat-stressed and normal Holstein cows

(2014) Yue Zheng et al.   CELL STRESS & CHAPERONES

Transcriptome analysis reveals dysregulation of innate immune response genes and neuronal activity-dependent genes in autism

(2014) Simone Gupta et al.   Nature Communications

Effect of heat stress on the expression profile of Hsp90 among Sahiwal (Bos indicus) and Frieswal (Bos indicus×Bos taurus) breed of cattle: A comparative study

(2013) Rajib Deb et al.   GENE

A cell-cell communication signal integrates quorum sensing and stress response

(2013) Jasmine Lee et al.   Nature Chemical Biology

An Exploration of Heat Tolerance in Mice Utilizing mRNA and microRNA Expression Analysis

(2013) Aminul Islam et al.   PLoS One

Software for Computing and Annotating Genomic Ranges

(2013) Michael Lawrence et al.   PLoS Computational Biology

Investigation of transferability of BovineSNP50 BeadChip from cattle to water buffalo for genome wide association study

(2012) Jun Jing Wu et al.   MOLECULAR BIOLOGY REPORTS

Identification of Genes Related to White and Black Plumage Formation by RNA-Seq from White and Black Feather Bulbs in Ducks

(2012) Shijun Li et al.   PLoS One

RNA-Seq Approach for Genetic Improvement of Meat Quality in Pig and Evolutionary Insight into the Substrate Specificity of Animal Carbonyl Reductases

(2012) Won Yong Jung et al.   PLoS One

Adaptation to hot climate and strategies to alleviate heat stress in livestock production

(2011) D. Renaudeau et al.   Animal

miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades

(2011) Marc R. Friedländer et al.   NUCLEIC ACIDS RESEARCH

Integrating miRNA and mRNA expression profiles in response to heat stress-induced injury in rat small intestine

(2010) Jin Yu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

MicroRNA Functions in Stress Responses

(2010) Anthony K.L. Leung et al.   MOLECULAR CELL

The UV response of the skin: a review of the MAPK, NFκB and TNFα signal transduction pathways

(2009) Visalini Muthusamy et al.   ARCHIVES OF DERMATOLOGICAL RESEARCH

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Receptor crosstalk: reprogramming B cell receptor signalling to an alternate pathway results in expression and secretion of the autoimmunity-associated cytokine, osteopontin

(2009) T. L. Rothstein et al.   JOURNAL OF INTERNAL MEDICINE

Season and physiological status affects the circadian body temperature rhythm of dairy cows

(2009) P.E. Kendall et al.   Livestock Science

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Elucidating the Role of Gonadal Hormones in Sexually Dimorphic Gene Coexpression Networks

(2008) Atila van Nas et al.   ENDOCRINOLOGY

Invited Review: Genes Involved in the Bovine Heat Stress Response

(2008) R.J. Collier et al.   JOURNAL OF DAIRY SCIENCE

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS