Rare gut microbiota associated with breeding success, hormone metabolites and ovarian cycle phase in the critically endangered eastern black rhino

Genetic variability and ontogeny predict microbiome structure in a disease-challenged montane amphibian

(2018) Sarah M. Griffiths et al.   ISME Journal

Impact of stress on the gut microbiome of free-ranging western lowland gorillas

(2018) Klára Vlčková et al.   MICROBIOLOGY-SGM

Keystone taxa as drivers of microbiome structure and functioning

(2018) Samiran Banerjee et al.   NATURE REVIEWS MICROBIOLOGY

Assembly and ecological function of the root microbiome across angiosperm plant species

(2018) Connor R. Fitzpatrick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disruption of maternal gut microbiota during gestation alters offspring microbiota and immunity

(2018) Donald D. Nyangahu et al.   Microbiome

Glucocorticoids modulate gastrointestinal microbiome in a wild bird

(2018) José C. Noguera et al.   Royal Society Open Science

Gut microbiome composition is associated with spatial structuring and social interactions in semi-feral Welsh Mountain ponies

(2018) Rachael E. Antwis et al.   Microbiome

The Effects of Captivity on the Mammalian Gut Microbiome

(2017) Valerie J. McKenzie et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Microbiome-Modulated Metabolites at the Interface of Host Immunity

(2017) Eran Blacher et al.   JOURNAL OF IMMUNOLOGY

Estrogen–gut microbiome axis: Physiological and clinical implications

(2017) James M. Baker et al.   MATURITAS

Temperature variation, bacterial diversity and fungal infection dynamics in the amphibian skin

(2017) Ana V. Longo et al.   MOLECULAR ECOLOGY

Interactions between the microbiota, immune and nervous systems in health and disease

(2017) Thomas C Fung et al.   NATURE NEUROSCIENCE

Extinctions, genetic erosion and conservation options for the black rhinoceros (Diceros bicornis)

(2017) Yoshan Moodley et al.   Scientific Reports

Microbiota fingerprints lose individually identifying features over time

(2017) David Wilkins et al.   Microbiome

Ovarian cycling and reproductive state shape the vaginal microbiota in wild baboons

(2017) Elizabeth A. Miller et al.   Microbiome

Exploring the Influence of Charismatic Characteristics on Flagship Outcomes in Zoo Visitors

(2017) Jeffrey C. Skibins et al.   HUMAN DIMENSIONS OF WILDLIFE

Stress and the microbiome: linking glucocorticoids to bacterial community dynamics in wild red squirrels

(2016) Mason R. Stothart et al.   Biology Letters

Estrogenicity of captive southern white rhinoceros diets and their association with fertility

(2016) Christopher W. Tubbs et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms

(2016) Bela Hausmann et al.   ISME Journal

Black rhinoceros (Diceros bicornis ) and domestic horse (Equus caballus ) hindgut microflora demonstrate similar fermentation responses to grape seed extract supplementation in vitro

(2016) N. F. Huntley et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

The role of Gut Microbiota in the development of obesity and Diabetes

(2016) Othman A. Baothman et al.   Lipids in Health and Disease

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The Microbiome of Animals: Implications for Conservation Biology

(2016) Simon Bahrndorff et al.   International Journal of Genomics

Microbiome impact on metabolism and function of sex, thyroid, growth and parathyroid hormones

(2015) Michał Kunc et al.   ACTA BIOCHIMICA POLONICA

Low birth rates and reproductive skew limit the viability of Europe’s captive eastern black rhinoceros, Diceros bicornis michaeli

(2015) Katie L. Edwards et al.   BIODIVERSITY AND CONSERVATION

Gut microbiota depletion from early adolescence in mice: Implications for brain and behaviour

(2015) Lieve Desbonnet et al.   BRAIN BEHAVIOR AND IMMUNITY

Diet Dominates Host Genotype in Shaping the Murine Gut Microbiota

(2015) Rachel N. Carmody et al.   Cell Host & Microbe

Maternal microbiome and pregnancy outcomes

(2015) Chelsea Fox et al.   FERTILITY AND STERILITY

Reproductive tract microbiome in assisted reproductive technologies

(2015) Jason M. Franasiak et al.   FERTILITY AND STERILITY

Introduction

(2015) Jason M. Franasiak et al.   FERTILITY AND STERILITY

Irregular ovarian activity, body condition and behavioural differences are associated with reproductive success in female eastern black rhinoceros (Diceros bicornis michaeli)

(2015) Katie L. Edwards et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Captivity for Conservation? Zoos at a Crossroads

(2015) Jozef Keulartz   JOURNAL OF AGRICULTURAL & ENVIRONMENTAL ETHICS

Microbial endocrinology: host-bacteria communication within the gut microbiome

(2015) S. Sandrini et al.   JOURNAL OF ENDOCRINOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Temporal and spatial variation of the human microbiota during pregnancy

(2015) Daniel B. DiGiulio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The functionality of the gastrointestinal microbiome in non-human animals

(2015) Irene Hanning et al.   Microbiome

Oxytocin regulates gastrointestinal motility, inflammation, macromolecular permeability, and mucosal maintenance in mice

(2014) Martha G. Welch et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Zoos have yet to unveil their full conservation potential

(2014) J. E. Fa et al.   ANIMAL CONSERVATION

Ex situ Diet Influences the Bacterial Community Associated with the Skin of Red-Eyed Tree Frogs (Agalychnis callidryas)

(2014) Rachael E. Antwis et al.   PLoS One

Impact of Plant Cover on Fitness and Behavioural Traits of Captive Red-Eyed Tree Frogs (Agalychnis callidryas)

(2014) Christopher J. Michaels et al.   PLoS One

Dietary history contributes to enterotype-like clustering and functional metagenomic content in the intestinal microbiome of wild mice

(2014) Jun Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Demonstrating microbial co-occurrence pattern analyses within and between ecosystems

(2014) Ryan J. Williams et al.   Frontiers in Microbiology

Cyclic changes in cortisol across the estrous cycle in parous and nulliparous Asian elephants

(2014) Kerry V Fanson et al.   Endocrine Connections

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stability of the Maternal Gut Microbiota During Late Pregnancy and Early Lactation

(2013) Ted Jost et al.   CURRENT MICROBIOLOGY

Vertical mother-neonate transfer of maternal gut bacteria via breastfeeding

(2013) Ted Jost et al.   ENVIRONMENTAL MICROBIOLOGY

The gut microbiome: the role of a virtual organ in the endocrinology of the host

(2013) James M Evans et al.   JOURNAL OF ENDOCRINOLOGY

Clostridium scindens: a human gut microbe with a high potential to convert glucocorticoids into androgens

(2013) Jason M. Ridlon et al.   JOURNAL OF LIPID RESEARCH

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Microbial Symbionts Accelerate Wound Healing via the Neuropeptide Hormone Oxytocin

(2013) Theofilos Poutahidis et al.   PLoS One

Critical role of gut microbiota in the production of biologically active, free catecholamines in the gut lumen of mice

(2012) Yasunari Asano et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy

(2012) Omry Koren et al.   CELL

Conservation and the Microbiome

(2012) Kent H. Redford et al.   CONSERVATION BIOLOGY

Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: a cross-sectional study

(2012) Roberto Flores et al.   Journal of Translational Medicine

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour

(2012) John F. Cryan et al.   NATURE REVIEWS NEUROSCIENCE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Rising fecal glucocorticoid concentrations track reproductive activity in the female giant panda (Ailuropoda melanoleuca)

(2011) David C. Kersey et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Gut feelings: the emerging biology of gut–brain communication

(2011) Emeran A. Mayer   NATURE REVIEWS NEUROSCIENCE

Exposure to a social stressor alters the structure of the intestinal microbiota: Implications for stressor-induced immunomodulation

(2010) Michael T. Bailey et al.   BRAIN BEHAVIOR AND IMMUNITY

Oxytocin as feeding inhibitor: Maintaining homeostasis in consummatory behavior

(2010) Pawel K. Olszewski et al.   PHARMACOLOGY BIOCHEMISTRY AND BEHAVIOR

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Fatty acid status in captive and free-ranging black rhinoceroses (Diceros bicornis)*

(2008) M. Clauss et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION