Application of the microarray technology to the transcriptional analysis of muscle phenotypes in pigs

Transcriptional profiling and miRNA-dependent regulatory network analysis of longissimus dorsi muscle during prenatal and adult stages in two distinct pig breeds

(2013) P. Siengdee et al.   ANIMAL GENETICS

Transcriptional analysis of intramuscular fatty acid composition in the longissimus thoracis muscle of Iberian × Landrace back-crossed pigs

(2013) R. N. Pena et al.   ANIMAL GENETICS

Transcriptome analysis of porcine M. semimembranosus divergent in intramuscular fat as a consequence of dietary protein restriction

(2013) Ruth M Hamill et al.   BMC GENOMICS

Identification of differences in microRNA transcriptomes between porcine oxidative and glycolytic skeletal muscles

(2013) Yingkai Liu et al.   BMC MOLECULAR BIOLOGY

Muscle transcriptomic profiles in pigs with divergent phenotypes for fatness traits

(2012) Angela C�novas et al.   BMC GENOMICS

Differential transcriptional analysis between red and white skeletal muscle of Chinese Meishan pigs

(2012) Yang Li et al.   International Journal of Biological Sciences

Functional analysis of muscle gene expression profiles associated with tenderness and intramuscular fat content in pork

(2012) Ruth M. Hamill et al.   MEAT SCIENCE

Transcriptional response of skeletal muscle to a low-protein gestation diet in porcine offspring accumulates in growth- and cell cycle-regulating pathways

(2012) Michael Oster et al.   PHYSIOLOGICAL GENOMICS

Comparison of Muscle Transcriptome between Pigs with Divergent Meat Quality Phenotypes Identifies Genes Related to Muscle Metabolism and Structure

(2012) Marie Damon et al.   PLoS One

A Gestational High Protein Diet Affects the Abundance of Muscle Transcripts Related to Cell Cycle Regulation throughout Development in Porcine Progeny

(2012) Michael Oster et al.   PLoS One

Segregation of Regulatory Polymorphisms with Effects on the Gluteus Medius Transcriptome in a Purebred Pig Population

(2012) Angela Cánovas et al.   PLoS One

Next-Generation Sequencing of the Porcine Skeletal Muscle Transcriptome for Computational Prediction of MicroRNA Gene Targets

(2012) Tara G. McDaneld et al.   PLoS One

MicroRNAome Comparison between Intramuscular and Subcutaneous Vascular Stem Cell Adipogenesis

(2012) Yunxue Guo et al.   PLoS One

An atlas of DNA methylomes in porcine adipose and muscle tissues

(2012) Mingzhou Li et al.   Nature Communications

Transcriptional profiling during foetal skeletal muscle development of Piau and Yorkshire-Landrace cross-bred pigs

(2011) B. P. Sollero et al.   ANIMAL GENETICS

Muscle transcriptome profiling in divergent phenotype swine breeds during growth using microarray and RT-PCR tools

(2011) M. D’Andrea et al.   ANIMAL GENETICS

Microarrays, deep sequencing and the true measure of the transcriptome

(2011) John H Malone et al.   BMC BIOLOGY

Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism

(2011) Laurence Liaubet et al.   BMC GENOMICS

Functional genomics and genetical genomics approaches towards elucidating networks of genes affecting meat performance in pigs

(2011) K. Wimmers et al.   Briefings in Functional Genomics

Detection of differentially expressed genes in the longissimus dorsi of Northeastern Indigenous and Large White pigs

(2011) Y. Gao et al.   GENETICS AND MOLECULAR RESEARCH

Genome-Wide Linkage Analysis of Global Gene Expression in Loin Muscle Tissue Identifies Candidate Genes in Pigs

(2011) Juan Pedro Steibel et al.   PLoS One

MicroRNA expression profiles of porcine skeletal muscle

(2010) B. Zhou et al.   ANIMAL GENETICS

Identification of expression QTL (eQTL) of genes expressed in porcine M. longissimus dorsi and associated with meat quality traits

(2010) Siriluck Ponsuksili et al.   BMC GENOMICS

microRNA-1 and microRNA-206 regulate skeletal muscle satellite cell proliferation and differentiation by repressing Pax7

(2010) Jian-Fu Chen et al.   JOURNAL OF CELL BIOLOGY

Global comparison of gene expression profiles between intramuscular and subcutaneous adipocytes of neonatal landrace pig using microarray

(2010) Guixuan Zhou et al.   MEAT SCIENCE

Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue

(2010) Ik Sang Cho et al.   MOLECULAR BIOLOGY REPORTS

RNA sequencing: advances, challenges and opportunities

(2010) Fatih Ozsolak et al.   NATURE REVIEWS GENETICS

Assessment of the swine protein-annotated oligonucleotide microarray

(2009) J. P. Steibel et al.   ANIMAL GENETICS

Identification and characterization of microRNAs from porcine skeletal muscle

(2009) S. S. Xie et al.   ANIMAL GENETICS

MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing

(2009) M. Nielsen et al.   ANIMAL GENETICS

MicroRNA transcriptome profiles during swine skeletal muscle development

(2009) Tara G McDaneld et al.   BMC GENOMICS

Transcriptomic and proteomic profiling of two porcine tissues using high-throughput technologies

(2009) Henrik Hornshøj et al.   BMC GENOMICS

MicroRNA control of muscle development and disease

(2009) Andrew H Williams et al.   CURRENT OPINION IN CELL BIOLOGY

Differentially-Expressed Genes in PigLongissimusMuscles with Contrasting Levels of Fat, as Identified by Combined Transcriptomic, Reverse Transcription PCR, and Proteomic Analyses

(2009) Jingshun Liu et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Tenderness – An enzymatic view

(2009) Caroline M. Kemp et al.   MEAT SCIENCE

A muscle transcriptome analysis identifies positional candidate genes for a complex trait in pig

(2008) V. Lobjois et al.   ANIMAL GENETICS

Trait correlated expression combined with expression QTL analysis reveals biological pathways and candidate genes affecting water holding capacity of muscle

(2008) Siriluck Ponsuksili et al.   BMC GENOMICS

Transcriptome architecture across tissues in the pig

(2008) André LJ Ferraz et al.   BMC GENOMICS

Accurate Discovery of Expression Quantitative Trait Loci Under Confounding From Spurious and Genuine Regulatory Hotspots

(2008) H. M. Kang et al.   GENETICS

Expression Profiling of Muscle Reveals Transcripts Differentially Expressed in Muscle That Affect Water-Holding Capacity of Pork

(2008) Siriluck Ponsuksili et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Regional differences in porcine adipocytes isolated from skeletal muscle and adipose tissues as identified by a proteomic approach

(2008) F. Gondret et al.   JOURNAL OF ANIMAL SCIENCE

Discovery of Porcine microRNAs and Profiling from Skeletal Muscle Tissues during Development

(2008) Ting-Hua Huang et al.   PLoS One

Expression profiling analysis for genes related to meat quality and carcass traits during postnatal development of backfat in two pig breeds

(2008) MingZhou Li et al.   Science in China. Series C, Life sciences / Chinese Academy of Sciences