Endophytic Communities of Transgenic Poplar Were Determined by the Environment and Niche Rather Than by Transgenic Events

Biological and molecular characterization of Chenopodium quinoa mitovirus 1 reveals a distinct sRNA response compared to cytoplasmic RNA viruses.

(2019) L. Nerva et al.   JOURNAL OF VIROLOGY

Analysis of extracellular polymeric substances (EPS) and ciprofloxacin-degrading microbial community in the combined Fe-C micro-electrolysis-UBAF process for the elimination of high-level ciprofloxacin

(2018) Longlong Zhang et al.   CHEMOSPHERE

Involvement of Burkholderiaceae and sulfurous volatiles in disease-suppressive soils

(2018) Víctor J. Carrión et al.   ISME Journal

Microbe and plant assisted-remediation of organic xenobiotics and its enhancement by genetically modified organisms and recombinant technology: A review

(2018) Imran Hussain et al.   SCIENCE OF THE TOTAL ENVIRONMENT

How Does Salinity Shape Bacterial and Fungal Microbiomes of Alnus glutinosa Roots?

(2018) Dominika Thiem et al.   Frontiers in Microbiology

Characterization of the antimonite- and arsenite-oxidizing bacterium Bosea sp. AS-1 and its potential application in arsenic removal

(2018) Xiaolu Lu et al.   JOURNAL OF HAZARDOUS MATERIALS

Diversity and Applications of Endophytic Actinobacteria of Plants in Special and Other Ecological Niches

(2018) Radha Singh et al.   Frontiers in Microbiology

Variation in the leaf and root microbiome of sugar maple (Acer saccharum) at an elevational range limit

(2018) Jessica Wallace et al.   PeerJ

Foliar fungal endophyte communities are structured by environment but not host ecotype in Panicum virgatum (switchgrass)

(2018) Briana K. Whitaker et al.   ECOLOGY

Associations of root-inhabiting fungi with herbaceous plant species of temperate forests in relation to soil chemical properties

(2018) Katarzyna Rożek et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Inner Plant Values: Diversity, Colonization and Benefits from Endophytic Bacteria

(2017) Hongwei Liu et al.   Frontiers in Microbiology

Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees

(2017) Bram Beckers et al.   Microbiome

Synthesis of siderophores by plant-associated metallotolerant bacteria under exposure to Cd 2+

(2016) Michał Złoch et al.   CHEMOSPHERE

In situ protein-SIP highlightsBurkholderiaceaeas key players degrading toluene by para ring hydroxylation in a constructed wetland model

(2016) Vanessa Lünsmann et al.   ENVIRONMENTAL MICROBIOLOGY

Complete genome sequence of the Variibacter gotjawalensis GJW-30T from soil of lava forest, Gotjawal

(2016) Jung-Sook Lee et al.   JOURNAL OF BIOTECHNOLOGY

Impact of Soil Salinity on the Structure of the Bacterial Endophytic Community Identified from the Roots of Caliph Medic (Medicago truncatula)

(2016) Mahmoud W. Yaish et al.   PLoS One

Lignin engineering in field-grown poplar trees affects the endosphere bacterial microbiome

(2016) Bram Beckers et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Communities of endophytic microorganisms in different developmental stages from a local variety as well as transgenic and conventional isogenic hybrids of maize

(2016) Kelly Justin da Silva et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies

(2016) Bram Beckers et al.   Frontiers in Microbiology

The Willow Microbiome Is Influenced by Soil Petroleum-Hydrocarbon Concentration with Plant Compartment-Specific Effects

(2016) Stacie Tardif et al.   Frontiers in Microbiology

The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity

(2016) Citlali Fonseca-García et al.   Frontiers in Microbiology

No adverse effects of transgenic maize on population dynamics of endophyticBacillus subtilisstrain B916-gfp

(2016) Chongsi Sun et al.   MicrobiologyOpen

Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley

(2015) Davide Bulgarelli et al.   Cell Host & Microbe

The importance of the microbiome of the plant holobiont

(2015) Philippe Vandenkoornhuyse et al.   NEW PHYTOLOGIST

High diversity of Bradyrhizobium strains isolated from several legume species and land uses in Brazilian tropical ecosystems

(2015) Amanda Azarias Guimarães et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Transgenic banana plants expressing Xanthomonas wilt resistance genes revealed a stable non-target bacterial colonization structure

(2015) Jean Nimusiima et al.   Scientific Reports

Effects of growth stage and fulvic acid on the diversity and dynamics of endophytic bacterial community in Stevia rebaudiana Bertoni leaves

(2015) Xuejian Yu et al.   Frontiers in Microbiology

Assessing bacterial communities in the rhizosphere of 8-year-old genetically modified poplar (Populus spp.)

(2015) Wenxu Zhu et al.   JOURNAL OF FORESTRY RESEARCH

Diversity and biopotential of endophytic actinomycetes from three medicinal plants in India

(2014) Gangwar Madhurama et al.   African Journal of Microbiology Research

Variibacter gotjawalensis gen. nov., sp. nov., isolated from soil of a lava forest

(2014) Kwang Kyu Kim et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Endophytic microbial community in two transgenic maize genotypes and in their near-isogenic non-transgenic maize genotype

(2014) Débora Alves Ferreira da Silva et al.   BMC MICROBIOLOGY

16S rDNA Pyrosequencing Analysis of Bacterial Community in Heavy Metals Polluted Soils

(2014) Marcin Gołębiewski et al.   MICROBIAL ECOLOGY

Reviving of the endophytic bacterial community as a putative mechanism of plant resistance

(2014) Olga Podolich et al.   PLANT AND SOIL

Phosphorus and Nitrogen Regulate Arbuscular Mycorrhizal Symbiosis in Petunia hybrida

(2014) Eva Nouri et al.   PLoS One

Characterization of rhizosphere and endophytic bacterial communities from leaves, stems and roots of medicinal Stellera chamaejasme L.

(2014) Hui Jin et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Comparative study of endophytic and endophytic diazotrophic bacterial communities across rice landraces grown in the highlands of northern Thailand

(2013) Chakrapong Rangjaroen et al.   ARCHIVES OF MICROBIOLOGY

Increased drought stress resilience of maize through endophytic colonization by Burkholderia phytofirmans PsJN and Enterobacter sp. FD17

(2013) Muhammad Naveed et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

A Multifactor Analysis of Fungal and Bacterial Community Structure in the Root Microbiome of Mature Populus deltoides Trees

(2013) Migun Shakya et al.   PLoS One

Rhizobium pongamiaesp. nov. from Root Nodules ofPongamia pinnata

(2013) Vigya Kesari et al.   Biomed Research International

High phosphate reduces host ability to develop arbuscular mycorrhizal symbiosis without affecting root calcium spiking responses to the fungus

(2013) Coline Balzergue et al.   Frontiers in Plant Science

Genetically modified Bt maize lines containing cry3Bb1, cry1A105 or cry1Ab2 do not affect the structure and functioning of root-associated endophyte communities

(2012) Michaela Prischl et al.   APPLIED SOIL ECOLOGY

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Distinct Microbial Communities within the Endosphere and Rhizosphere of Populus deltoides Roots across Contrasting Soil Types

(2011) Neil R. Gottel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Genomic analysis of the potential for aromatic compounds biodegradation in Burkholderiales

(2011) Danilo Pérez-Pantoja et al.   ENVIRONMENTAL MICROBIOLOGY

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Increased Fitness of Rice Plants to Abiotic Stress Via Habitat Adapted Symbiosis: A Strategy for Mitigating Impacts of Climate Change

(2011) Regina S. Redman et al.   PLoS One

Effects of Plant Genotype and Growth Stage on the Betaproteobacterial Communities Associated with Different Potato Cultivars in Two Fields

(2010) O. Inceoglu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil organic matter quality as a link between microbial community structure and vegetation composition along a successional gradient in a boreal forest

(2010) Päivi Merilä et al.   APPLIED SOIL ECOLOGY

Culturable endophytic filamentous fungi from leaves of transgenic imidazolinone-tolerant sugarcane and its non-transgenic isolines

(2010) Rodrigo Makowiecky Stuart et al.   ARCHIVES OF MICROBIOLOGY

Poplar as a feedstock for biofuels: A review of compositional characteristics

(2010) Poulomi Sannigrahi et al.   Biofuels Bioproducts & Biorefining-Biofpr

Insidious effects of sequencing errors on perceived diversity in molecular surveys

(2010) Ian A. Dickie   NEW PHYTOLOGIST

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The communities of endophytic diazotrophic bacteria in cultivated rice (Oryza sativa L.)

(2009) Janpen Prakamhang et al.   APPLIED SOIL ECOLOGY

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Diversity of endophytic bacterial communities in poplar grown under field conditions

(2009) Kristina Ulrich et al.   FEMS MICROBIOLOGY ECOLOGY

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

Plant growth-promoting bacteria in the rhizo- and endosphere of plants: Their role, colonization, mechanisms involved and prospects for utilization

(2009) Stéphane Compant et al.   SOIL BIOLOGY & BIOCHEMISTRY

Expression of jasmonic ethylene responsive factor gene in transgenic poplar tree leads to increased salt tolerance

(2009) Y. Li et al.   TREE PHYSIOLOGY

Endophytic actinomycetes isolated from Aquilaria crassna Pierre ex Lec and screening of plant growth promoters production

(2009) Pongrawee Nimnoi et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Transgenic tobacco revealing altered bacterial diversity in the rhizosphere during early plant development

(2008) Fernando D. Andreote et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Rapid Mineralization of the Phenylurea Herbicide Diuron by Variovorax sp. Strain SRS16 in Pure Culture and within a Two-Member Consortium

(2008) S. R. Sorensen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Endosporium, a new endoconidial genus allied to the Myriangiales

(2008) A. Tsuneda et al.   Botany

Ectomycorrhizal fungal community in alkaline-saline soil in northeastern China

(2008) Takahide A. Ishida et al.   MYCORRHIZA

Environmental and anthropogenic controls over bacterial communities in wetland soils

(2008) W. H. Hartman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Properties of bacterial endophytes and their proposed role in plant growth

(2008) Pablo R. Hardoim et al.   TRENDS IN MICROBIOLOGY