Successional Dynamics and Seascape-Level Patterns of Microbial Communities on the Canopy-Forming Kelps Nereocystis luetkeana and Macrocystis pyrifera

Incubation with macroalgae induces large shifts in water column microbiota, but minor changes to the epibiota of co-occurring macroalgae

(2018) Melissa Y. Chen et al.   MOLECULAR ECOLOGY

Elevated temperature drives kelp microbiome dysbiosis, while elevated carbon dioxide induces water microbiome disruption

(2018) Jeremiah J. Minich et al.   PLoS One

Coastal urbanisation affects microbial communities on a dominant marine holobiont

(2018) Ezequiel M. Marzinelli et al.   npj Biofilms and Microbiomes

Diverse Bacteria Utilize Alginate Within the Microbiome of the Giant Kelp Macrocystis pyrifera

(2018) Jordan D. Lin et al.   Frontiers in Microbiology

Sympatric kelp species share a large portion of their surface bacterial communities

(2017) Matthew A. Lemay et al.   ENVIRONMENTAL MICROBIOLOGY

The dynamics of Kelp Forests in the Northeast Pacific Ocean and the relationship with environmental drivers

(2017) Catherine A. Pfister et al.   JOURNAL OF ECOLOGY

Identifying the plant-associated microbiome across aquatic and terrestrial environments: the effects of amplification method on taxa discovery

(2017) Sara L. Jackrel et al.   Molecular Ecology Resources

A Functional Perspective Analysis of Macroalgae and Epiphytic Bacterial Community Interaction

(2017) July Z. Florez et al.   Frontiers in Microbiology

Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships

(2017) Justin R. Seymour et al.   Nature Microbiology

Resource-dependent attenuation of species interactions during bacterial succession

(2016) Damian W Rivett et al.   ISME Journal

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Global patterns of kelp forest change over the past half-century

(2016) Kira A. Krumhansl et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Host and Environmental Specificity in Bacterial Communities Associated to Two Highly Invasive Marine Species (Genus Asparagopsis)

(2016) Tânia Aires et al.   Frontiers in Microbiology

Diversity and Temporal Dynamics of the Epiphytic Bacterial Communities Associated with the Canopy-Forming Seaweed Cystoseira compressa (Esper) Gerloff and Nizamuddin

(2016) Francesco P. Mancuso et al.   Frontiers in Microbiology

Continental-scale variation in seaweed host-associated bacterial communities is a function of host condition, not geography

(2015) Ezequiel M. Marzinelli et al.   ENVIRONMENTAL MICROBIOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Patterns and controls of reef-scale production of dissolved organic carbon by giant kelpMacrocystis pyrifera

(2015) Daniel C. Reed et al.   LIMNOLOGY AND OCEANOGRAPHY

Investigating the causes and consequences of symbiont shuffling in a multi-partner reef coral symbiosis under environmental change

(2015) R. Cunning et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria

(2015) Marjolaine Martin et al.   Frontiers in Microbiology

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

(2015) William Walters et al.   mSystems

Granulosicoccus undariae sp. nov., a member of the family Granulosicoccaceae isolated from a brown algae reservoir and emended description of the genus Granulosicoccus

(2014) Sooyeon Park et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Granulosicoccus marinus sp. nov., isolated from Antarctic seawater, and emended description of the genus Granulosicoccus

(2014) K. Baek et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Host rules: spatial stability of bacterial communities associated with marine sponges (Irciniaspp.) in the Western Mediterranean Sea

(2013) Lucía Pita et al.   FEMS MICROBIOLOGY ECOLOGY

Compounds associated with algal surfaces mediate epiphytic colonization of the marine macroalgaFucus vesiculosus

(2013) Tim Lachnit et al.   FEMS MICROBIOLOGY ECOLOGY

Community composition of thePlanctomycetesassociated with different macroalgae

(2013) Joana Bondoso et al.   FEMS MICROBIOLOGY ECOLOGY

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Diversity and Abundance of the Bacterial Community of the Red Macroalga Porphyra umbilicalis: Did Bacterial Farmers Produce Macroalgae?

(2013) Lilibeth N. Miranda et al.   PLoS One

The Ecology of Microbial Communities Associated with Macrocystis pyrifera

(2013) Vanessa K. Michelou et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea

(2012) Mia M Bengtsson et al.   ISME Journal

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

(2012) J Gregory Caporaso et al.   ISME Journal

Phylogenetic Analysis Suggests That Habitat Filtering Is Structuring Marine Bacterial Communities Across the Globe

(2012) Mikael Pontarp et al.   MICROBIAL ECOLOGY

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Bacterial community assembly based on functional genes rather than species

(2011) C. Burke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Seasonal dynamics of bacterial biofilms on the kelp Laminaria hyperborea

(2010) MM Bengtsson et al.   AQUATIC MICROBIAL ECOLOGY

Chemotactic response of marine bacteria to the extracellular products of Synechococcus and Prochlorococcus

(2010) JR Seymour et al.   AQUATIC MICROBIAL ECOLOGY

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Planctomycetes dominate biofilms on surfaces of the kelp Laminaria hyperborea

(2010) Mia M Bengtsson et al.   BMC MICROBIOLOGY

Disaster taxa in microbially mediated metazoans: how endosymbionts and environmental catastrophes influence the adaptive capacity of reef corals

(2010) ADRIENNE M. S. CORREA et al.   GLOBAL CHANGE BIOLOGY

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Specific epibacterial communities on macroalgae: phylogeny matters more than habitat

(2009) T Lachnit et al.   Aquatic Biology

Granulosicoccus coccoides sp. nov., isolated from leaves of seagrass (Zostera marina)

(2009) V. V. Kurilenko et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Phylogenetic analysis of bacteria associated with Laminaria saccharina

(2008) Tim Staufenberger et al.   FEMS MICROBIOLOGY ECOLOGY