A common genomic code for chromatin architecture and recombination landscape

GC content elevates mutation and recombination rates in the yeastSaccharomyces cerevisiae

(2018) Denis A. Kiktev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural selection interacts with recombination to shape the evolution of hybrid genomes

(2018) Molly Schumer et al.   SCIENCE

Structural Variation Shapes the Landscape of Recombination in Mouse

(2017) Andrew P. Morgan et al.   GENETICS

In vivo binding of PRDM9 reveals interactions with noncanonical genomic sites

(2017) Corinne Grey et al.   GENOME RESEARCH

CTCF prevents genomic instability by promoting homologous recombination-directed DNA double-strand break repair

(2017) Fengchao Lang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromatin States in Mouse Sperm Correlate with Embryonic and Adult Regulatory Landscapes

(2017) Yoon Hee Jung et al.   Cell Reports

Repeated losses of PRDM9-directed recombination despite the conservation of PRDM9 across vertebrates

(2017) Zachary Baker et al.   eLife

Structural Variation Shapes the Landscape of Recombination in Mouse

(2017) Andrew P. Morgan et al.   GENETICS

Discovering a binary CTCF code with a little help from BORIS

(2017) Victor V. Lobanenkov et al.   Nucleus

Discovering a binary CTCF code with a little help from BORIS

(2017) Victor V. Lobanenkov et al.   Nucleus

CTCF facilitates DNA double-strand break repair by enhancing homologous recombination repair

(2017) Khalid Hilmi et al.   Science Advances

Tetrad analysis in plants and fungi finds large differences in gene conversion rates but no GC bias

(2017) Haoxuan Liu et al.   Nature Ecology & Evolution

An Isochore Framework Underlies Chromatin Architecture

(2017) Kamel Jabbari et al.   PLoS One

The Landscape of Mouse Meiotic Double-Strand Break Formation, Processing, and Repair

(2016) Julian Lange et al.   CELL

Cell-of-Origin-Specific 3D Genome Structure Acquired during Somatic Cell Reprogramming

(2016) Peter Hugo Lodewijk Krijger et al.   Cell Stem Cell

A genomic view on epilepsy and autism candidate genes

(2016) Kamel Jabbari et al.   GENOMICS

Specification and epigenetic programming of the human germ line

(2016) Walfred W. C. Tang et al.   NATURE REVIEWS GENETICS

Juicebox Provides a Visualization System for Hi-C Contact Maps with Unlimited Zoom

(2016) Neva C. Durand et al.   Cell Systems

Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells

(2015) Jop Kind et al.   CELL

CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription

(2015) Zhonghui Tang et al.   CELL

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Initiation of Meiotic Homologous Recombination: Flexibility, Impact of Histone Modifications, and Chromatin Remodeling

(2015) Lóránt Székvölgyi et al.   Cold Spring Harbor Perspectives in Biology

Affinity-seq detects genome-wide PRDM9 binding sites and reveals the impact of prior chromatin modifications on mammalian recombination hotspot usage

(2015) Michael Walker et al.   Epigenetics & Chromatin

Comparative Hi-C Reveals that CTCF Underlies Evolution of Chromosomal Domain Architecture

(2015) Matteo Vietri Rudan et al.   Cell Reports

A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

(2014) Suhas S.P. Rao et al.   CELL

Nuclear position dictates DNA repair pathway choice

(2014) Charlène Lemaître et al.   GENES & DEVELOPMENT

Transmission Distortion Affecting Human Noncrossover but Not Crossover Recombination: A Hidden Source of Meiotic Drive

(2014) Linda Odenthal-Hesse et al.   PLoS Genetics

GAT: a simulation framework for testing the association of genomic intervals

(2013) A. Heger et al.   BIOINFORMATICS

Programmed induction of DNA double strand breaks during meiosis: setting up communication between DNA and the chromosome structure

(2013) Valérie Borde et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Wapl is an essential regulator of chromatin structure and chromosome segregation

(2013) Antonio Tedeschi et al.   NATURE

Meiotic recombination in mammals: localization and regulation

(2013) Frédéric Baudat et al.   NATURE REVIEWS GENETICS

Genetic Recombination Is Targeted towards Gene Promoter Regions in Dogs

(2013) Adam Auton et al.   PLoS Genetics

Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence

(2012) W. Meuleman et al.   GENOME RESEARCH

Genetic recombination is directed away from functional genomic elements in mice

(2012) Kevin Brick et al.   NATURE

Topological domains in mammalian genomes identified by analysis of chromatin interactions

(2012) Jesse R. Dixon et al.   NATURE

Spatial partitioning of the regulatory landscape of the X-inactivation centre

(2012) Elphège P. Nora et al.   NATURE

The Impressionistic Landscape of Meiotic Recombination

(2011) Michael Lichten et al.   CELL

Spo11-Accessory Proteins Link Double-Strand Break Sites to the Chromosome Axis in Early Meiotic Recombination

(2011) Silvia Panizza et al.   CELL

A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation

(2011) Jing Pan et al.   CELL

Genome-wide analysis reveals novel molecular features of mouse recombination hotspots

(2011) Fatima Smagulova et al.   NATURE

Distinct Properties of the XY Pseudoautosomal Region Crucial for Male Meiosis

(2011) L. Kauppi et al.   SCIENCE

Nucleosome occupancy landscape and dynamics at mouse recombination hotspots

(2010) Irina V Getun et al.   EMBO REPORTS

Genomic Runs of Homozygosity Record Population History and Consanguinity

(2010) Mirna Kirin et al.   PLoS One

Prdm9 Controls Activation of Mammalian Recombination Hotspots

(2010) E. D. Parvanov et al.   SCIENCE

Drive Against Hotspot Motifs in Primates Implicates the PRDM9 Gene in Meiotic Recombination

(2010) S. Myers et al.   SCIENCE

PRDM9 Is a Major Determinant of Meiotic Recombination Hotspots in Humans and Mice

(2010) F. Baudat et al.   SCIENCE

Genome organization influences partner selection for chromosomal rearrangements

(2010) Patrick J. Wijchers et al.   TRENDS IN GENETICS

Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes

(2009) Laurent Duret et al.   Annual Review of Genomics and Human Genetics

The evolution of isochore patterns in vertebrate genomes

(2009) Maria Costantini et al.   BMC GENOMICS

GC Content and Recombination: Reassessing the Causal Effects for the Saccharomyces cerevisiae Genome

(2009) M.-C. Marsolier-Kergoat et al.   GENETICS