Homeostasis in the soybean miRNA396–GRF network is essential for productive soybean cyst nematode infections

APlasmodium-like virulence effector of the soybean cyst nematode suppresses plant innate immunity

(2016) Jason B. Noon et al.   NEW PHYTOLOGIST

Identification of jasmonic acid-associated microRNAs and characterization of the regulatory roles of the miR319/TCP4 module under root-knot nematode stress in tomato

(2015) Wenchao Zhao et al.   JOURNAL OF EXPERIMENTAL BOTANY

Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology

(2015) Mohammad Amin Omidbakhshfard et al.   Molecular Plant

Identification of microRNAs and their mRNA targets during soybean nodule development: functional analysis of the role of miR393j-3p in soybean nodulation

(2015) Zhe Yan et al.   NEW PHYTOLOGIST

Differentially expressed small RNAs in Arabidopsis galls formed byMeloidogyne javanica: a functional role for miR390 and its TAS3-derived tasiRNAs

(2015) Javier Cabrera et al.   NEW PHYTOLOGIST

Identification and functional characterization of soybean root hair microRNAs expressed in response to Bradyrhizobium japonicum infection

(2015) Zhe Yan et al.   PLANT BIOTECHNOLOGY JOURNAL

MicroRNA miR396 Regulates the Switch between Stem Cells and Transit-Amplifying Cells in Arabidopsis Roots

(2015) Ramiro E. Rodriguez et al.   PLANT CELL

MicroRNA167-Directed Regulation of the Auxin Response FactorsGmARF8aandGmARF8bIs Required for Soybean Nodulation and Lateral Root Development

(2015) Youning Wang et al.   PLANT PHYSIOLOGY

Identification of MicroRNAs in Response to Different Day Lengths in Soybean Using High-Throughput Sequencing and qRT-PCR

(2015) Wenbin Li et al.   PLoS One

The Diversity, Biogenesis, and Activities of Endogenous Silencing Small RNAs inArabidopsis

(2014) Nicolas G. Bologna et al.   Annual Review of Plant Biology

SFGD: a comprehensive platform for mining functional information from soybean transcriptome data and its use in identifying acyl-lipid metabolism pathways

(2014) Juan Yu et al.   BMC GENOMICS

Growth–Defense Tradeoffs in Plants: A Balancing Act to Optimize Fitness

(2014) Bethany Huot et al.   Molecular Plant

miR396a-Mediated Basic Helix–Loop–Helix Transcription Factor bHLH74 Repression Acts as a Regulator for Root Growth in Arabidopsis Seedlings

(2014) Maolin Bao et al.   PLANT AND CELL PHYSIOLOGY

Soybean miR172c Targets the Repressive AP2 Transcription Factor NNC1 to ActivateENOD40Expression and Regulate Nodule Initiation

(2014) Youning Wang et al.   PLANT CELL

Post-transcriptional control ofGRFtranscription factors by microRNA miR396 and GIF co-activator affects leaf size and longevity

(2014) Juan M. Debernardi et al.   PLANT JOURNAL

Synchronization of Developmental Processes and Defense Signaling by Growth Regulating Transcription Factors

(2014) Jinyi Liu et al.   PLoS One

Novel MiRNA and PhasiRNA Biogenesis Networks in Soybean Roots from Two Sister Lines That Are Resistant and Susceptible to SCN Race 4

(2014) Miaoyun Xu et al.   PLoS One

Dynamics of chromatin accessibility and gene regulation by MADS-domain transcription factors in flower development

(2014) Alice Pajoro et al.   GENOME BIOLOGY

Genome-wide identification of soybean microRNAs and their targets reveals their organ-specificity and responses to phosphate starvation

(2013) Feng Xu et al.   BMC GENOMICS

Top 10 plant-parasitic nematodes in molecular plant pathology

(2013) John T. Jones et al.   MOLECULAR PLANT PATHOLOGY

miR172 Regulates Soybean Nodulation

(2013) Zhe Yan et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Repression of Growth Regulating Factors by the MicroRNA396 Inhibits Cell Proliferation by UV-B Radiation in Arabidopsis Leaves

(2013) R. Casadevall et al.   PLANT CELL

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

miR396 affects mycorrhization and root meristem activity in the legumeMedicago truncatula

(2013) Jérémie Bazin et al.   PLANT JOURNAL

Molecular Mechanism of microRNA396 Mediating Pistil Development in Arabidopsis

(2013) G. Liang et al.   PLANT PHYSIOLOGY

Ectopic Expression of miR160 Results in Auxin Hypersensitivity, Cytokinin Hyposensitivity, and Inhibition of Symbiotic Nodule Development in Soybean

(2013) M. Turner et al.   PLANT PHYSIOLOGY

Elucidation of miRNAs-Mediated Responses to Low Nitrogen Stress by Deep Sequencing of Two Soybean Genotypes

(2013) Yejian Wang et al.   PLoS One

Identification and Comparative Analysis of Cadmium Tolerance-Associated miRNAs and Their Targets in Two Soybean Genotypes

(2013) Xiaolong Fang et al.   PLoS One

Identification of soybean seed developmental stage-specific and tissue-specific miRNA targets by degradome sequencing

(2012) Md Shamimuzzaman et al.   BMC GENOMICS

The BnGRF2 gene (GRF2-like gene from Brassica napus) enhances seed oil production through regulating cell number and plant photosynthesis

(2012) Jing Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Nematode-Induced Endoreduplication in Plant Host Cells: Why and How?

(2012) Janice de Almeida Engler et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A

(2012) J.-S. Kim et al.   PLANT CELL

The Arabidopsis MicroRNA396-GRF1/GRF3 Regulatory Module Acts as a Developmental Regulator in the Reprogramming of Root Cells during Cyst Nematode Infection

(2012) T. Hewezi et al.   PLANT PHYSIOLOGY

Soybean Yield and Heterodera Glycines Response to Rotation, Tillage, and Genetic Resistance

(2011) S. P. Conley et al.   AGRONOMY JOURNAL

Identification of novel soybean microRNAs involved in abiotic and biotic stresses

(2011) Franceli R Kulcheski et al.   BMC GENOMICS

Microarray profiling reveals microRNAs involving soybean resistance to Phytophthora sojae

(2011) Na Guo et al.   GENOME

MicroRNAs in the shoot apical meristem of soybean

(2011) Chui E. Wong et al.   JOURNAL OF EXPERIMENTAL BOTANY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

ANGUSTIFOLIA3 Plays Roles in Adaxial/Abaxial Patterning and Growth in Leaf Morphogenesis

(2010) Gorou Horiguchi et al.   PLANT AND CELL PHYSIOLOGY

miR390,Arabidopsis TAS3tasiRNAs, and TheirAUXIN RESPONSE FACTORTargets Define an Autoregulatory Network Quantitatively Regulating Lateral Root Growth

(2010) Elena Marin et al.   PLANT CELL

Orchestration of the Floral Transition and Floral Development in Arabidopsis by the Bifunctional Transcription Factor APETALA2

(2010) L. Yant et al.   PLANT CELL

Misexpression of miR482, miR1512, and miR1515 Increases Soybean Nodulation

(2010) H. Li et al.   PLANT PHYSIOLOGY

Identification of MicroRNAs Involved in Pathogen-Associated Molecular Pattern-Triggered Plant Innate Immunity

(2010) Y. Li et al.   PLANT PHYSIOLOGY

miR156-Regulated SPL Transcription Factors Define an Endogenous Flowering Pathway in Arabidopsis thaliana

(2009) Jia-Wei Wang et al.   CELL

The Sequential Action of miR156 and miR172 Regulates Developmental Timing in Arabidopsis

(2009) Gang Wu et al.   CELL

Control of cell proliferation in Arabidopsis thaliana by microRNA miR396

(2009) R. E. Rodriguez et al.   DEVELOPMENT

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

A soybean (Glycine max) polyubiquitin promoter gives strong constitutive expression in transgenic soybean

(2009) Carlos M. Hernandez-Garcia et al.   PLANT CELL REPORTS

A gene expression analysis of syncytia laser microdissected from the roots of the Glycine max (soybean) genotype PI 548402 (Peking) undergoing a resistant reaction after infection by Heterodera glycines (soybean cyst nematode)

(2009) Vincent P. Klink et al.   PLANT MOLECULAR BIOLOGY

The Arabidopsis thaliana double-stranded RNA binding protein DRB1 directs guide strand selection from microRNA duplexes

(2009) A. L. Eamens et al.   RNA

MicroRNA maturation and action—the expanding roles of ARGONAUTEs

(2008) Allison C Mallory et al.   CURRENT OPINION IN PLANT BIOLOGY

ArabidopsisSmall RNAs and Their Targets During Cyst Nematode Parasitism

(2008) Tarek Hewezi et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The transcriptome of syncytia induced by the cyst nematodeHeterodera schachtiiin Arabidopsis roots

(2008) Dagmar Szakasits et al.   PLANT JOURNAL

Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

(2008) H.-H. Liu et al.   RNA