Complete Genome Sequence of the Wolbachia wAlbB Endosymbiont of Aedes albopictus

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

Evolutionary Genetics of Cytoplasmic Incompatibility Genes cifA and cifB in Prophage WO of Wolbachia

(2018) Amelia R I Lindsey et al.   Genome Biology and Evolution

Type IV secretion in Gram-negative and Gram-positive bacteria

(2018) Elisabeth Grohmann et al.   MOLECULAR MICROBIOLOGY

Culex pipiens crossing type diversity is governed by an amplified and polymorphic operon of Wolbachia

(2018) Manon Bonneau et al.   Nature Communications

Mi Casa es Su Casa: how an intracellular symbiont manipulates host biology

(2017) Tamanash Bhattacharya et al.   ENVIRONMENTAL MICROBIOLOGY

Large-Scale Identification of Wolbachia pipientis Effectors

(2017) Danny W. Rice et al.   Genome Biology and Evolution

The bacterium Wolbachia exploits host innate immunity to establish a symbiotic relationship with the dengue vector mosquito Aedes aegypti

(2017) Xiaoling Pan et al.   ISME Journal

Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper

(2017) Jaime Huerta-Cepas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Prophage WO genes recapitulate and enhance Wolbachia-induced cytoplasmic incompatibility

(2017) Daniel P. LePage et al.   NATURE

Field- and clinically derived estimates ofWolbachia-mediated blocking of dengue virus transmission potential inAedes aegyptimosquitoes

(2017) Lauren B. Carrington et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomics of the Asian tiger mosquito, Aedes albopictus : insights into the recent worldwide invasion

(2017) Panayiota Kotsakiozi et al.   Ecology and Evolution

A Wolbachia deubiquitylating enzyme induces cytoplasmic incompatibility

(2017) John F. Beckmann et al.   Nature Microbiology

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

Identification and Characterization of a Candidate Wolbachia pipientis Type IV Effector That Interacts with the Actin Cytoskeleton

(2016) Kathy B. Sheehan et al.   mBio

Eukaryotic association module in phage WO genomes from Wolbachia

(2016) Sarah R. Bordenstein et al.   Nature Communications

Differential Susceptibilities of Aedes aegypti and Aedes albopictus from the Americas to Zika Virus

(2016) Thais Chouin-Carneiro et al.   PLoS Neglected Tropical Diseases

The wMel Strain of Wolbachia Reduces Transmission of Chikungunya Virus in Aedes aegypti

(2016) Matthew T. Aliota et al.   PLoS Neglected Tropical Diseases

Breakdown of coevolution between symbiotic bacteriaWolbachiaand their filarial hosts

(2016) Emilie Lefoulon et al.   PeerJ

The wMel strain of Wolbachia Reduces Transmission of Zika virus by Aedes aegypti

(2016) Matthew T. Aliota et al.   Scientific Reports

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

(2015) Jaime Huerta-Cepas et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database: towards a more sustainable future

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Native Wolbachia from Aedes albopictus Blocks Chikungunya Virus Infection In Cellulo

(2015) Vincent Raquin et al.   PLoS One

circlize implements and enhances circular visualization in R

(2014) Zuguang Gu et al.   BIOINFORMATICS

UpSet: Visualization of Intersecting Sets

(2014) Alexander Lex et al.   IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Zika Virus in Gabon (Central Africa) – 2007: A New Threat from Aedes albopictus?

(2014) Gilda Grard et al.   PLoS Neglected Tropical Diseases

Wolbachia Enhances West Nile Virus (WNV) Infection in the Mosquito Culex tarsalis

(2014) Brittany L. Dodson et al.   PLoS Neglected Tropical Diseases

Repurposing of approved drugs from the human pharmacopoeia to target Wolbachia endosymbionts of onchocerciasis and lymphatic filariasis

(2014) Kelly L. Johnston et al.   International Journal for Parasitology-Drugs and Drug Resistance

Recent genome reduction ofWolbachiainDrosophila recenstargets phage WO and narrows candidates for reproductive parasitism

(2014) Jason A. Metcalf et al.   PeerJ

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

(2013) Chen-Shan Chin et al.   NATURE METHODS

The Native Wolbachia Symbionts Limit Transmission of Dengue Virus in Aedes albopictus

(2013) Laurence Mousson et al.   PLoS Neglected Tropical Diseases

Ehrlichia type IV secretion effector ECH0825 is translocated to mitochondria and curbs ROS and apoptosis by upregulating host MnSOD

(2012) Hongyan Liu et al.   CELLULAR MICROBIOLOGY

Whole-Genome Sequence of Wolbachia Strain wAlbB, an Endosymbiont of Tiger Mosquito Vector Aedes albopictus

(2012) P. Mavingui et al.   JOURNAL OF BACTERIOLOGY

The methylomes of six bacteria

(2012) Iain A. Murray et al.   NUCLEIC ACIDS RESEARCH

DoriC 5.0: an updated database of oriC regions in both bacterial and archaeal genomes

(2012) Feng Gao et al.   NUCLEIC ACIDS RESEARCH

Characterization of Transcription Factors That Regulate the Type IV Secretion System and Riboflavin Biosynthesis in Wolbachia of Brugia malayi

(2012) Zhiru Li et al.   PLoS One

Autophagy regulates Wolbachia populations across diverse symbiotic associations

(2012) D. Voronin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reactive Oxygen Species Production and Brugia pahangi Survivorship in Aedes polynesiensis with Artificial Wolbachia Infection Types

(2012) Elizabeth S. Andrews et al.   PLoS Pathogens

Analysis of Genes Encoding Penicillin-Binding Proteins in Clinical Isolates of Acinetobacter baumannii

(2011) Rodrigo Cayô et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Wolbachia Strain wAlbB Enhances Infection by the Rodent Malaria Parasite Plasmodium berghei in Anopheles gambiae Mosquitoes

(2011) Grant L. Hughes et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The cytochrome bd respiratory oxygen reductases

(2011) Vitaliy B. Borisov et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Short- and Long-term Evolutionary Dynamics of Bacterial Insertion Sequences: Insights from Wolbachia Endosymbionts

(2011) Nicolas Cerveau et al.   Genome Biology and Evolution

The wMel Wolbachia strain blocks dengue and invades caged Aedes aegypti populations

(2011) T. Walker et al.   NATURE

The impact of endosymbionts on the evolution of host sex-determination mechanisms

(2011) Richard Cordaux et al.   TRENDS IN GENETICS

Wolbachia Infections Are Virulent and Inhibit the Human Malaria Parasite Plasmodium Falciparum in Anopheles Gambiae

(2011) Grant L. Hughes et al.   PLoS Pathogens

ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes

(2011) Alessandro M Varani et al.   GENOME BIOLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Anaplasma phagocytophilum and Ehrlichia chaffeensis type IV secretion and Ank proteins

(2010) Yasuko Rikihisa et al.   CURRENT OPINION IN MICROBIOLOGY

Direct detection of DNA methylation during single-molecule, real-time sequencing

(2010) Benjamin A Flusberg et al.   NATURE METHODS

Wolbachia Stimulates Immune Gene Expression and Inhibits Plasmodium Development in Anopheles gambiae

(2010) Zakaria Kambris et al.   PLoS Pathogens

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Persistent Wolbachia and Cultivable Bacteria Infection in the Reproductive and Somatic Tissues of the Mosquito Vector Aedes albopictus

(2009) Karima Zouache et al.   PLoS One

Immune Activation by Life-Shortening Wolbachia and Reduced Filarial Competence in Mosquitoes

(2009) Z. Kambris et al.   SCIENCE

How many species are infected with Wolbachia? – a statistical analysis of current data

(2008) Kirsten Hilgenboecker et al.   FEMS MICROBIOLOGY LETTERS

Combined ivermectin and doxycycline treatment has microfilaricidal and adulticidal activity against Dirofilaria immitis in experimentally infected dogs

(2008) C. Bazzocchi et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Genetic and Functional Characterization of the Type IV Secretion System in Wolbachia

(2008) E. Rances et al.   JOURNAL OF BACTERIOLOGY

Wolbachia: master manipulators of invertebrate biology

(2008) John H. Werren et al.   NATURE REVIEWS MICROBIOLOGY

Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation

(2008) Samuel V. Angiuoli et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Characterization and transcriptional analysis of two gene clusters for type IV secretion machinery in Wolbachia of Armadillidium vulgare

(2008) Christine Félix et al.   RESEARCH IN MICROBIOLOGY

Real-Time DNA Sequencing from Single Polymerase Molecules

(2008) J. Eid et al.   SCIENCE