Integrating phylogeography and ecological niche modelling to test diversification hypotheses using a Neotropical rodent
Published 2019 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Integrating phylogeography and ecological niche modelling to test diversification hypotheses using a Neotropical rodent
Authors
Keywords
Biogeography, Amazon River, Neotropical rodent, Riverine barrier, Refugia, Ecological speciation, Niche conservatism
Journal
EVOLUTIONARY ECOLOGY
Volume 33, Issue 1, Pages 111-148
Publisher
Springer Nature
Online
2019-01-24
DOI
10.1007/s10682-019-09968-1
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Testing the role of climate in speciation: New methods and applications to squamate reptiles (lizards and snakes)
- (2018) Tereza Jezkova et al. MOLECULAR ECOLOGY
- The role of Pleistocene climate change in the genetic variability, distribution and demography of Proechimys cuvieri and P. guyannensis (Rodentia: Echimyidae) in northeastern Amazonia
- (2018) Claudia Regina Silva et al. PLoS One
- The Amazon at sea: Onset and stages of the Amazon River from a marine record, with special reference to Neogene plant turnover in the drainage basin
- (2017) Carina Hoorn et al. GLOBAL AND PLANETARY CHANGE
- Phylogeography of the dry vegetation endemic species Nephila sexpunctata (Araneae: Araneidae) suggests recent expansion of the Neotropical Dry Diagonal
- (2017) Luiz Filipe de Macedo Bartoleti et al. JOURNAL OF BIOGEOGRAPHY
- Wide but not impermeable: Testing the riverine barrier hypothesis for an Amazonian plant species
- (2017) Alison G. Nazareno et al. MOLECULAR ECOLOGY
- Neotropical forest expansion during the last glacial period challenges refuge hypothesis
- (2016) Yuri L. R. Leite et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Are we overestimating the niche? Removing marginal localities helps ecological niche models detect environmental barriers
- (2016) Mariano Soley-Guardia et al. Ecology and Evolution
- Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga
- (2015) Fernanda P Werneck et al. BMC EVOLUTIONARY BIOLOGY
- The influence of ecological and geographical context in the radiation of Neotropical sigmodontine rodents
- (2015) Andrés Parada et al. BMC EVOLUTIONARY BIOLOGY
- Right around the Amazon: the origin of the circum-Amazonian distribution in Tangara cayana
- (2015) Aaron Zvi Savit et al. FOLIA ZOOLOGICA
- Biogeography of squirrel monkeys (genus Saimiri): South-central Amazon origin and rapid pan-Amazonian diversification of a lowland primate
- (2015) Jessica W. Lynch Alfaro et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Spatial and temporal patterns of diversification on the Amazon: A test of the riverine hypothesis for all diurnal primates of Rio Negro and Rio Branco in Brazil
- (2015) Jean P. Boubli et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Phylogenetic niche conservatism and the evolutionary basis of ecological speciation
- (2014) R. Alexander Pyron et al. BIOLOGICAL REVIEWS
- The role of tectonics in the late Quaternary evolution of Brazil's Amazonian landscape
- (2014) Dilce F. Rossetti EARTH-SCIENCE REVIEWS
- Spatial filtering to reduce sampling bias can improve the performance of ecological niche models
- (2014) Robert A. Boria et al. ECOLOGICAL MODELLING
- The effect of spatially marginal localities in modelling species niches and distributions
- (2014) Mariano Soley-Guardia et al. JOURNAL OF BIOGEOGRAPHY
- Phylogeography and ecological niche modelling, coupled with the fossil pollen record, unravel the demographic history of a Neotropical swamp palm through the Quaternary
- (2014) Natácia Evangelista de Lima et al. JOURNAL OF BIOGEOGRAPHY
- Multiple speciation across the Andes and throughout Amazonia: the case of the spot-backed antbird species complex (Hylophylax naevius/Hylophylax naevioides)
- (2014) Alexandre M. Fernandes et al. JOURNAL OF BIOGEOGRAPHY
- Timing the diversification of the Amazonian biota: butterfly divergences are consistent with Pleistocene refugia
- (2014) Ivonne J. Garzón-Orduña et al. JOURNAL OF BIOGEOGRAPHY
- Correction: In the Wake of Invasion: Tracing the Historical Biogeography of the South American Cricetid Radiation (Rodentia, Sigmodontinae)
- (2014) PLoS One
- SDMtoolbox: a python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses
- (2014) Jason L. Brown Methods in Ecology and Evolution
- Seasonal flooding regime and ecological traits influence genetic structure of two small rodents
- (2014) Rita Gomes Rocha et al. Ecology and Evolution
- Interspecific Dominance Via Vocal Interactions Mediates Altitudinal Zonation in Neotropical Singing Mice
- (2013) Bret Pasch et al. AMERICAN NATURALIST
- Avian species composition across the Amazon River: the roles of dispersal limitation and environmental heterogeneity
- (2013) Lars Y. Pomara et al. JOURNAL OF BIOGEOGRAPHY
- Making better Maxentmodels of species distributions: complexity, overfitting and evaluation
- (2013) Aleksandar Radosavljevic et al. JOURNAL OF BIOGEOGRAPHY
- Phylogeographic structure is strong in the Atlantic Forest; predictive power of correlative paleodistribution models, not always
- (2013) João Filipe Riva Tonini et al. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH
- Sigmodontine rodents diversified in South America prior to the complete rise of the Panamanian Isthmus
- (2013) Júlio F. Vilela et al. JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Ecological niche models in phylogeographic studies: applications, advances and precautions
- (2013) Diego F. Alvarado-Serrano et al. Molecular Ecology Resources
- Revisiting Amazonian phylogeography: insights into diversification hypotheses and novel perspectives
- (2013) Rafael N. Leite et al. ORGANISMS DIVERSITY & EVOLUTION
- Climate sensitivity, sea level and atmospheric carbon dioxide
- (2013) J. Hansen et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- (2012) M. Kearse et al. BIOINFORMATICS
- DEEP DIVERSIFICATION AND LONG-TERM PERSISTENCE IN THE SOUTH AMERICAN ‘DRY DIAGONAL’: INTEGRATING CONTINENT-WIDE PHYLOGEOGRAPHY AND DISTRIBUTION MODELING OF GECKOS
- (2012) Fernanda P. Werneck et al. EVOLUTION
- Climatic stability in the Brazilian Cerrado: implications for biogeographical connections of South American savannas, species richness and conservation in a biodiversity hotspot
- (2012) Fernanda P. Werneck et al. JOURNAL OF BIOGEOGRAPHY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- jModelTest 2: more models, new heuristics and parallel computing
- (2012) Diego Darriba et al. NATURE METHODS
- A New Area of Endemism for Amazonian Birds in the Rio Negro Basin
- (2012) Sérgio H. Borges et al. Wilson Journal of Ornithology
- Ecological niche conservatism: a time-structured review of evidence
- (2011) A. Townsend Peterson JOURNAL OF BIOGEOGRAPHY
- Integrating statistical genetic and geospatial methods brings new power to phylogeography
- (2011) Lauren M. Chan et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years
- (2011) C. C. Ribas et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Causes Of Species Richness Patterns Across Space, Time, And Clades And The Role Of “Ecological Limits”
- (2011) John J. Wiens QUARTERLY REVIEW OF BIOLOGY
- A statistical explanation of MaxEnt for ecologists
- (2010) Jane Elith et al. DIVERSITY AND DISTRIBUTIONS
- The Late Miocene paleogeography of the Amazon Basin and the evolution of the Amazon River system
- (2010) Edgardo M. Latrubesse et al. EARTH-SCIENCE REVIEWS
- ENMTools: a toolbox for comparative studies of environmental niche models
- (2010) Dan L. Warren et al. ECOGRAPHY
- The effect of the extent of the study region on GIS models of species geographic distributions and estimates of niche evolution: preliminary tests with montane rodents (genus Nephelomys) in Venezuela
- (2010) Robert P. Anderson et al. JOURNAL OF BIOGEOGRAPHY
- S-DIVA (Statistical Dispersal-Vicariance Analysis): A tool for inferring biogeographic histories
- (2010) Yan Yu et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity
- (2010) C. Hoorn et al. SCIENCE
- The art of modelling range-shifting species
- (2010) Jane Elith et al. Methods in Ecology and Evolution
- Mitochondrial DNA as a marker of molecular diversity: a reappraisal
- (2009) N. GALTIER et al. MOLECULAR ECOLOGY
- Stability Predicts Genetic Diversity in the Brazilian Atlantic Forest Hotspot
- (2009) A. C. Carnaval et al. SCIENCE
- ENVIRONMENTAL NICHE EQUIVALENCY VERSUS CONSERVATISM: QUANTITATIVE APPROACHES TO NICHE EVOLUTION
- (2008) Dan L. Warren et al. EVOLUTION
- Paleodistributions and Comparative Molecular Phylogeography of Leafcutter Ants (Atta spp.) Provide New Insight into the Origins of Amazonian Diversity
- (2008) Scott E. Solomon et al. PLoS One
- Integrating GIS-based environmental data into evolutionary biology
- (2008) Kenneth H. Kozak et al. TRENDS IN ECOLOGY & EVOLUTION
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now