Ecological niche models in phylogeographic studies: applications, advances and precautions
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Title
Ecological niche models in phylogeographic studies: applications, advances and precautions
Authors
Keywords
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Journal
Molecular Ecology Resources
Volume 14, Issue 2, Pages 233-248
Publisher
Wiley
Online
2013-10-12
DOI
10.1111/1755-0998.12184
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- (2015) Robert P. Anderson Annals of the New York Academy of Sciences
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- (2012) Fernanda P. Werneck et al. JOURNAL OF BIOGEOGRAPHY
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- (2012) A. M. FLORIO et al. JOURNAL OF EVOLUTIONARY BIOLOGY
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- (2012) Eric D. Crandall et al. MOLECULAR ECOLOGY
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- (2012) JASON L. BROWN et al. MOLECULAR ECOLOGY
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