Phylogenomic analysis of cytochrome P450 multigene family and their differential expression analysis in Solanum lycopersicum L. suggested tissue specific promoters

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

(2016) Jana Trifinopoulos et al.   NUCLEIC ACIDS RESEARCH

ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap

(2015) Tauno Metsalu et al.   NUCLEIC ACIDS RESEARCH

Transcriptome profiling of cytokinin and auxin regulation in tomato root

(2013) Sarika Gupta et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide identification and expression analyses of cytochromeP450genes in mulberry (Morus notabilis)

(2013) Bi Ma et al.   Journal of Integrative Plant Biology

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ectopic Overexpression of SsCBF1, a CRT/DRE-Binding Factor from the Nightshade Plant Solanum lycopersicoides, Confers Freezing and Salt Tolerance in Transgenic Arabidopsis

(2013) Lili Zhang et al.   PLoS One

Phylogenomic analysis of UDP glycosyltransferase 1 multigene family in Linum usitatissimum identified genes with varied expression patterns

(2012) Vitthal T Barvkar et al.   BMC GENOMICS

Structural organization and classification of cytochrome P450 genes in flax (Linum usitatissimum L.)

(2012) Peram Ravindra Babu et al.   GENE

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

A P450-centric view of plant evolution

(2011) David Nelson et al.   PLANT JOURNAL

TCP14 and TCP15 affect internode length and leaf shape in Arabidopsis

(2011) Martin Kieffer et al.   PLANT JOURNAL

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases

(2010) Satish K Guttikonda et al.   BMC PLANT BIOLOGY

In silico analysis of promoter regions from cold-induced genes in rice (Oryza sativa L.) and Arabidopsis thaliana reveals the importance of combinatorial control

(2009) Angelica Lindlöf et al.   BIOINFORMATICS

The cytochrome P450 (CYP) gene superfamily in Daphnia pulex

(2009) William S Baldwin et al.   BMC GENOMICS

Insights into the function and evolution of P450s in plant steroid metabolism

(2009) Toshiyuki Ohnishi et al.   PHYTOCHEMISTRY

Benzoxazinoid biosynthesis, a model for evolution of secondary metabolic pathways in plants

(2009) Monika Frey et al.   PHYTOCHEMISTRY

Metabolic Diversification--Independent Assembly of Operon-Like Gene Clusters in Different Plants

(2008) B. Field et al.   SCIENCE