A Review on T Cell Epitopes Identified Using Prediction and Cell-Mediated Immune Models for Mycobacterium tuberculosis and Bordetella pertussis
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A Review on T Cell Epitopes Identified Using Prediction and Cell-Mediated Immune Models for Mycobacterium tuberculosis and Bordetella pertussis
Authors
Keywords
-
Journal
Frontiers in Immunology
Volume 9, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2018-11-29
DOI
10.3389/fimmu.2018.02778
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Identification of mycobacterial ribosomal proteins as targets for CD4+ T cells that enhance protective immunity in tuberculosis
- (2018) Steven C. Kennedy et al. INFECTION AND IMMUNITY
- Evaluation of adenylate cyclase toxoid antigen in acellular pertussis vaccines using a Bordetella pertussis challenge model in mice.
- (2018) Dylan T. Boehm et al. INFECTION AND IMMUNITY
- Transcriptomic Analysis of CD4+T Cells Reveals Novel Immune Signatures of Latent Tuberculosis
- (2018) Julie G. Burel et al. JOURNAL OF IMMUNOLOGY
- Microbiota epitope similarity either dampens or enhances the immunogenicity of disease-associated antigenic epitopes
- (2018) Sebastian Carrasco Pro et al. PLoS One
- Combinatory use of distinct single-cell RNA-seq analytical platforms reveals the heterogeneous transcriptome response
- (2018) Yukie Kashima et al. Scientific Reports
- Single-Cell RNA-Seq Reveals Transcriptional Heterogeneity in Latent and Reactivated HIV-Infected Cells
- (2018) Monica Golumbeanu et al. Cell Reports
- Extreme heterogeneity of influenza virus infection in single cells
- (2018) Alistair B Russell et al. eLife
- Urinary Peptides As a Novel Source of T Cell Allergen Epitopes
- (2018) Ricardo da Silva Antunes et al. Frontiers in Immunology
- Whole-Cell or Acellular Pertussis Primary Immunizations in Infancy Determines Adolescent Cellular Immune Profiles
- (2018) Saskia van der Lee et al. Frontiers in Immunology
- Predicting HLA CD4 Immunogenicity in Human Populations
- (2018) Sandeep Kumar Dhanda et al. Frontiers in Immunology
- Th1/Th17 polarization persists following whole-cell pertussis vaccination despite repeated acellular boosters
- (2018) Ricardo da Silva Antunes et al. JOURNAL OF CLINICAL INVESTIGATION
- An Integrated Workflow To Assess Technical and Biological Variability of Cell Population Frequencies in Human Peripheral Blood by Flow Cytometry
- (2017) Julie G. Burel et al. JOURNAL OF IMMUNOLOGY
- Quantifiable predictive features define epitope-specific T cell receptor repertoires
- (2017) Pradyot Dash et al. NATURE
- Identifying specificity groups in the T cell receptor repertoire
- (2017) Jacob Glanville et al. NATURE
- What Is Wrong with Pertussis Vaccine Immunity?
- (2017) Dimitri A. Diavatopoulos et al. Cold Spring Harbor Perspectives in Biology
- What Is Wrong with Pertussis Vaccine Immunity?
- (2017) Christiane S. Eberhardt et al. Cold Spring Harbor Perspectives in Biology
- What Is Wrong with Pertussis Vaccine Immunity?
- (2017) Nicolas Burdin et al. Cold Spring Harbor Perspectives in Biology
- Unique phenotypes and clonal expansions of human CD4 effector memory T cells re-expressing CD45RA
- (2017) Yuan Tian et al. Nature Communications
- Global Assessment of Dengue Virus-Specific CD4+ T Cell Responses in Dengue-Endemic Areas
- (2017) Alba Grifoni et al. Frontiers in Immunology
- Comprehensive definition of human immunodominant CD8 antigens in tuberculosis
- (2017) Deborah A. Lewinsohn et al. npj Vaccines
- Definition of Human Epitopes Recognized in Tetanus Toxoid and Development of an Assay Strategy to Detect Ex Vivo Tetanus CD4+ T Cell Responses
- (2017) Ricardo da Silva Antunes et al. PLoS One
- Mass Cytometry: Single Cells, Many Features
- (2016) Matthew H. Spitzer et al. CELL
- Th1 versus Th2 T cell polarization by whole-cell and acellular childhood pertussis vaccines persists upon re-immunization in adolescence and adulthood
- (2016) Tara Bancroft et al. CELLULAR IMMUNOLOGY
- Lack of allergy to timothy grass pollen is not a passive phenomenon but associated with the allergen-specific modulation of immune reactivity
- (2016) D. Hinz et al. CLINICAL AND EXPERIMENTAL ALLERGY
- Sequence conservation predicts T cell reactivity against ragweed allergens
- (2016) J. Pham et al. CLINICAL AND EXPERIMENTAL ALLERGY
- Protective Effect of Contemporary Pertussis Vaccines: A Systematic Review and Meta-analysis
- (2016) T. Roice Fulton et al. CLINICAL INFECTIOUS DISEASES
- T-cell recognition is shaped by epitope sequence conservation in the host proteome and microbiome
- (2016) Anne Bresciani et al. IMMUNOLOGY
- T-cell epitope conservation across allergen species is a major determinant of immunogenicity
- (2016) Luise Westernberg et al. JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY
- A Cytokine-Independent Approach To Identify Antigen-Specific Human Germinal Center T Follicular Helper Cells and Rare Antigen-Specific CD4+T Cells in Blood
- (2016) Jennifer M. Dan et al. JOURNAL OF IMMUNOLOGY
- HLA-DRB1 Alleles Are Associated With Different Magnitudes of Dengue Virus–Specific CD4+T-Cell Responses
- (2016) Daniela Weiskopf et al. JOURNAL OF INFECTIOUS DISEASES
- A large fraction of HLA class I ligands are proteasome-generated spliced peptides
- (2016) Juliane Liepe et al. SCIENCE
- A Quantitative Analysis of Complexity of Human Pathogen-Specific CD4 T Cell Responses in Healthy M. tuberculosis Infected South Africans
- (2016) Cecilia S. Lindestam Arlehamn et al. PLoS Pathogens
- Cytotoxic CD4 T Cells: Differentiation, Function, and Application to Dengue Virus Infection
- (2016) Yuan Tian et al. Frontiers in Immunology
- Comparison of Three Whole-Cell Pertussis Vaccines in the Baboon Model of Pertussis
- (2015) Jason M. Warfel et al. Clinical and Vaccine Immunology
- Pertussis vaccines and the challenge of inducing durable immunity
- (2015) Jason M Warfel et al. CURRENT OPINION IN IMMUNOLOGY
- Development and validation of a broad scheme for prediction of HLA class II restricted T cell epitopes
- (2015) Sinu Paul et al. JOURNAL OF IMMUNOLOGICAL METHODS
- A Population Response Analysis Approach To Assign Class II HLA-Epitope Restrictions
- (2015) Sinu Paul et al. JOURNAL OF IMMUNOLOGY
- Human CD8+T-Cell Responses Against the 4 Dengue Virus Serotypes Are Associated With Distinct Patterns of Protein Targets
- (2015) Daniela Weiskopf et al. JOURNAL OF INFECTIOUS DISEASES
- Methods for discovery and characterization of cell subsets in high dimensional mass cytometry data
- (2015) Kirsten E. Diggins et al. METHODS
- Analysis of Major Histocompatibility Complex (MHC) Immunopeptidomes Using Mass Spectrometry
- (2015) Etienne Caron et al. MOLECULAR & CELLULAR PROTEOMICS
- Dengue virus infection elicits highly polarized CX3CR1+cytotoxic CD4+T cells associated with protective immunity
- (2015) Daniela Weiskopf et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Impairment of immunity to Candida and Mycobacterium in humans with bi-allelic RORC mutations
- (2015) S. Okada et al. SCIENCE
- A side-by-side comparison of T cell reactivity to fifty-nine Mycobacterium tuberculosis antigens in diverse populations from five continents
- (2015) Chelsea Carpenter et al. TUBERCULOSIS
- Automatic Generation of Validated Specific Epitope Sets
- (2015) Sebastian Carrasco Pro et al. Journal of Immunology Research
- Definition of CD4 Immunosignatures Associated with MTB
- (2015) Cecilia S. Lindestam Arlehamn et al. Frontiers in Immunology
- Waning vaccine immunity in teenagers primed with whole cell and acellular pertussis vaccine: recent epidemiology
- (2014) Sarah L Sheridan et al. Expert Review of Vaccines
- Substantial gaps in knowledge of Bordetella pertussis antibody and T cell epitopes relevant for natural immunity and vaccine efficacy
- (2014) Kerrie Vaughan et al. HUMAN IMMUNOLOGY
- Transcriptional Profile of Tuberculosis Antigen–Specific T Cells Reveals Novel Multifunctional Features
- (2014) Cecilia Lindestam Arlehamn et al. JOURNAL OF IMMUNOLOGY
- The Human CD8+T Cell Responses Induced by a Live Attenuated Tetravalent Dengue Vaccine Are Directed against Highly Conserved Epitopes
- (2014) Daniela Weiskopf et al. JOURNAL OF VIROLOGY
- Mutational escape of CD8+ T cell epitopes: implications for prevention and therapy of persistent hepatitis virus infections
- (2014) Joerg Timm et al. MEDICAL MICROBIOLOGY AND IMMUNOLOGY
- Immunological consequences of intragenus conservation ofMycobacterium tuberculosisT-cell epitopes
- (2014) Cecilia S. Lindestam Arlehamn et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Antigens for CD4 and CD8 T Cells in Tuberculosis
- (2014) C. S. Lindestam Arlehamn et al. Cold Spring Harbor Perspectives in Medicine
- Influence of HIV and HCV on T cell antigen presentation and challenges in the development of vaccines
- (2014) Mina John et al. Frontiers in Microbiology
- Pertussis re-emergence in the post-vaccination era
- (2013) Elena Chiappini et al. BMC INFECTIOUS DISEASES
- The Pertussis Problem
- (2013) S. A. Plotkin CLINICAL INFECTIOUS DISEASES
- Flow-cytometric analysis of rare antigen-specific T cells
- (2013) Petra Bacher et al. CYTOMETRY PART A
- Pertussis resurgence: waning immunity and pathogen adaptation – two sides of the same coin
- (2013) F. R. MOOI et al. EPIDEMIOLOGY AND INFECTION
- A strategy to determine HLA class II restriction broadly covering the DR, DP, and DQ allelic variants most commonly expressed in the general population
- (2013) Denise M. McKinney et al. IMMUNOGENETICS
- Antigen-Reactive T Cell Enrichment for Direct, High-Resolution Analysis of the Human Naive and Memory Th Cell Repertoire
- (2013) P. Bacher et al. JOURNAL OF IMMUNOLOGY
- Immune Responses to Pertussis Vaccines and Disease
- (2013) K. M. Edwards et al. JOURNAL OF INFECTIOUS DISEASES
- Comprehensive analysis of dengue virus-specific responses supports an HLA-linked protective role for CD8+ T cells
- (2013) D. Weiskopf et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Acellular pertussis vaccines protect against disease but fail to prevent infection and transmission in a nonhuman primate model
- (2013) J. M. Warfel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Memory T Cells in Latent Mycobacterium tuberculosis Infection Are Directed against Three Antigenic Islands and Largely Contained in a CXCR3+CCR6+ Th1 Subset
- (2013) Cecilia S. Lindestam Arlehamn et al. PLoS Pathogens
- Analysis of T Cell Responses to the Major Allergens from German Cockroach: Epitope Specificity and Relationship to IgE Production
- (2012) C. Oseroff et al. JOURNAL OF IMMUNOLOGY
- Dissecting Mechanisms of Immunodominance to the Common Tuberculosis Antigens ESAT-6, CFP10, Rv2031c (hspX), Rv2654c (TB7.7), and Rv1038c (EsxJ)
- (2012) C. S. Lindestam Arlehamn et al. JOURNAL OF IMMUNOLOGY
- T Cell Responses to Known Allergen Proteins Are Differently Polarized and Account for a Variable Fraction of Total Response to Allergen Extracts
- (2012) C. Oseroff et al. JOURNAL OF IMMUNOLOGY
- Newly Emerging Clones of Bordetella pertussis Carrying prn2 and ptxP3 Alleles Implicated in Australian Pertussis Epidemic in 2008–2010
- (2012) Sophie Octavia et al. JOURNAL OF INFECTIOUS DISEASES
- Bordetella pertussis infection induces a mucosal IL-17 response and long-lived Th17 and Th1 immune memory cells in nonhuman primates
- (2012) J M Warfel et al. Mucosal Immunology
- Polyfunctional CD4+ T Cell Responses to Immunodominant Epitopes Correlate with Disease Activity of Virulent Salmonella
- (2012) Matt Maybeno et al. PLoS One
- Differences in avidity of IgG antibodies to pertussis toxin after acellular pertussis booster vaccination and natural infection
- (2012) Alex-Mikael Barkoff et al. VACCINE
- Antigen-Specific Acquired Immunity in Human Brucellosis: Implications for Diagnosis, Prognosis, and Vaccine Development
- (2012) Anthony P. Cannella et al. Frontiers in Cellular and Infection Microbiology
- Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes
- (2011) Jason Greenbaum et al. IMMUNOGENETICS
- Human CD8+ and CD4+ T Cell Memory to Lymphocytic Choriomeningitis Virus Infection
- (2011) M. F. Kotturi et al. JOURNAL OF VIROLOGY
- Comparative genomics of prevaccination and modern Bordetella pertussis strains
- (2010) Marieke J Bart et al. BMC GENOMICS
- Pertussis toxin and adenylate cyclase toxin: key virulence factors ofBordetella pertussisand cell biology tools
- (2010) Nicholas H Carbonetti Future Microbiology
- Divergent Motifs but Overlapping Binding Repertoires of Six HLA-DQ Molecules Frequently Expressed in the Worldwide Human Population
- (2010) J. Sidney et al. JOURNAL OF IMMUNOLOGY
- Genome-Based In Silico Identification of New Mycobacterium tuberculosis Antigens Activating Polyfunctional CD8+ T Cells in Human Tuberculosis
- (2010) S. T. Tang et al. JOURNAL OF IMMUNOLOGY
- Five HLA-DP Molecules Frequently Expressed in the Worldwide Human Population Share a Common HLA Supertypic Binding Specificity
- (2010) John Sidney et al. JOURNAL OF IMMUNOLOGY
- Molecular Determinants of T Cell Epitope Recognition to the Common Timothy Grass Allergen
- (2010) C. Oseroff et al. JOURNAL OF IMMUNOLOGY
- Antibody responses to pertussis toxin display different kinetics after clinical Bordetella pertussis infection than after vaccination with an acellular pertussis vaccine
- (2010) T. Dalby et al. JOURNAL OF MEDICAL MICROBIOLOGY
- Insight into Evolution of Bordetella pertussis from Comparative Genomic Analysis: Evidence of Vaccine-Driven Selection
- (2010) Sophie Octavia et al. MOLECULAR BIOLOGY AND EVOLUTION
- Transforming growth-interacting factor (TGIF ) regulates proliferation and differentiation of human myeloid leukemia cells
- (2009) Rizwan Hamid et al. Molecular Oncology
- Analysis of Mycobacterium tuberculosis-Specific CD8 T-Cells in Patients with Active Tuberculosis and in Individuals with Latent Infection
- (2009) Nadia Caccamo et al. PLoS One
- HLA class I supertypes: a revised and updated classification
- (2008) John Sidney et al. BMC IMMUNOLOGY
- Immunomic Analysis of the Repertoire of T-Cell Specificities for Influenza A Virus in Humans
- (2008) E. Assarsson et al. JOURNAL OF VIROLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started