Depth-Dependent Environmental Drivers of Microbial Plankton Community Structure in the Northern Gulf of Mexico

Marine archaeal dynamics and interactions with the microbial community over 5 years from surface to seafloor

(2017) Alma E Parada et al.   ISME Journal

Influence of mesoscale oceanographic features on pelagic food webs in the Gulf of Mexico

(2017) R. J. David Wells et al.   MARINE BIOLOGY

Microbe biogeography tracks water masses in a dynamic oceanic frontal system

(2017) Anni Djurhuus et al.   Royal Society Open Science

The Gulf of Mexico ecosystem, six years after the Macondo oil well blowout

(2016) Samantha B. Joye et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Predictability of mesoscale circulation throughout the water column in the Gulf of Mexico

(2016) Yuley Cardona et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Submesoscale currents in the northern Gulf of Mexico: Deep phenomena and dispersion over the continental slope

(2016) Annalisa Bracco et al.   OCEAN MODELLING

How Did the Deepwater Horizon Oil Spill Impact Deep-Sea Ecosystems?

(2016) Charles Fisher et al.   OCEANOGRAPHY

Mississippi River Plume Enriches Microbial Diversity in the Northern Gulf of Mexico

(2016) Olivia U. Mason et al.   Frontiers in Microbiology

Archaeal enrichment in the hypoxic zone in the northern Gulf of Mexico

(2015) Lauren E. Gillies et al.   ENVIRONMENTAL MICROBIOLOGY

Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples

(2015) Alma E. Parada et al.   ENVIRONMENTAL MICROBIOLOGY

Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone

(2015) Sangita Ganesh et al.   ISME Journal

Biogeochemical and metagenomic analysis of nitrite accumulation in the Gulf of Mexico hypoxic zone

(2015) Laura A. Bristow et al.   LIMNOLOGY AND OCEANOGRAPHY

Uncovering hidden worlds of ocean biodiversity

(2015) E. V. Armbrust et al.   SCIENCE

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Determinants of community structure in the global plankton interactome

(2015) G. Lima-Mendez et al.   SCIENCE

Microbially Mediated Transformations of Phosphorus in the Sea: New Views of an Old Cycle

(2014) David M. Karl   Annual Review of Marine Science

Microbial Dynamics Following the Macondo Oil Well Blowout across Gulf of Mexico Environments

(2014) Samantha B. Joye et al.   BIOSCIENCE

The Earth Microbiome project: successes and aspirations

(2014) Jack A Gilbert et al.   BMC BIOLOGY

Genomic and Metabolic Diversity of Marine Group I Thaumarchaeota in the Mesopelagic of Two Subtropical Gyres

(2014) Brandon K. Swan et al.   PLoS One

The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments

(2014) Nicole M. Scott et al.   Frontiers in Microbiology

Metatranscriptomic Analyses of Plankton Communities Inhabiting Surface and Subpycnocline Waters of the Chesapeake Bay during Oxic-Anoxic-Oxic Transitions

(2013) Ian Hewson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Variations in pelagic bacterial communities in the North Atlantic Ocean coincide with water bodies

(2013) RL Hahnke et al.   AQUATIC MICROBIAL ECOLOGY

Succession of Hydrocarbon-Degrading Bacteria in the Aftermath of the Deepwater Horizon Oil Spill in the Gulf of Mexico

(2013) Eric A. Dubinsky et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Changes in free-living bacterial community diversity reflect the magnitude of environmental variability

(2013) Alice. C. Ortmann et al.   FEMS MICROBIOLOGY ECOLOGY

Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill

(2013) Adam R Rivers et al.   ISME Journal

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Holocene dynamics of the Florida Everglades with respect to climate, dustfall, and tropical storms

(2013) P. H. Glaser et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Analysis of Thaumarchaeota Populations from the Northern Gulf of Mexico

(2013) Bradley B. Tolar et al.   Frontiers in Microbiology

Analysis of Composition and Structure of Coastal to Mesopelagic Bacterioplankton Communities in the Northern Gulf of Mexico

(2013) Gary M. King et al.   Frontiers in Microbiology

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Varying mesoscale structures influence larval fish distribution in the northern Gulf of Mexico

(2012) D Lindo-Atichati et al.   MARINE ECOLOGY PROGRESS SERIES

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Impacts of diverted freshwater on dissolved organic matter and microbial communities in Barataria Bay, Louisiana, U.S.A.

(2011) Thomas S. Bianchi et al.   MARINE ENVIRONMENTAL RESEARCH

Toward molecular trait-based ecology through integration of biogeochemical, geographical and metagenomic data

(2011) J. Raes et al.   Molecular Systems Biology

Drivers of bacterial  -diversity depend on spatial scale

(2011) J. B. H. Martiny et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill

(2011) M. C. Redmond et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Nitrogen Cycling Processes in Oxygen Minimum Zones

(2010) Phyllis Lam et al.   Annual Review of Marine Science

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Loop Current Cycle: Coupled Response of the Loop Current with Deep Flows

(2010) Y.-L. Chang et al.   JOURNAL OF PHYSICAL OCEANOGRAPHY

Global patterns and predictors of marine biodiversity across taxa

(2010) Derek P. Tittensor et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Revising the nitrogen cycle in the Peruvian oxygen minimum zone

(2009) P. Lam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Topographic Rossby waves in the Gulf of Mexico

(2009) Peter Hamilton   PROGRESS IN OCEANOGRAPHY

Distinctiveness of the mesopelagic fish fauna in the Gulf of Mexico

(2008) Jessica L. Bangma et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

FORWARD SELECTION OF EXPLANATORY VARIABLES

(2008) F. Guillaume Blanchet et al.   ECOLOGY

Mean Flow in the Gulf of Mexico

(2008) Wilton Sturges et al.   JOURNAL OF PHYSICAL OCEANOGRAPHY

Oxygen minimum zones (OMZs) in the modern ocean

(2008) A. Paulmier et al.   PROGRESS IN OCEANOGRAPHY

Spreading Dead Zones and Consequences for Marine Ecosystems

(2008) R. J. Diaz et al.   SCIENCE