RNA helicases mediate structural transitions and compositional changes in pre-ribosomal complexes

Modular assembly of the nucleolar pre-60S ribosomal subunit

(2018) Zahra Assur Sanghai et al.   NATURE

Structural and functional analysis of ribosome assembly factor Efg1

(2018) Sheng Shu et al.   NUCLEIC ACIDS RESEARCH

Cryo-EM structure of an early precursor of large ribosomal subunit reveals a half-assembled intermediate

(2018) Dejian Zhou et al.   Protein & Cell

3.2-Å-resolution structure of the 90S preribosome before A1 pre-rRNA cleavage

(2017) Jingdong Cheng et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The complete structure of the small-subunit processome

(2017) Jonas Barandun et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

High-throughput RNA structure probing reveals critical folding events during early 60S ribosome assembly in yeast

(2017) Elena Burlacu et al.   Nature Communications

Reconstitution of the complete pathway of ITS2 processing at the pre-ribosome

(2017) Lisa Fromm et al.   Nature Communications

3.2-Å-resolution structure of the 90S preribosome before A1 pre-rRNA cleavage

(2017) Jingdong Cheng et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The complete structure of the small-subunit processome

(2017) Jonas Barandun et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Tor1 and CK2 kinases control a switch between alternative ribosome biogenesis pathways in a growth-dependent manner

(2017) Isabelle C. Kos-Braun et al.   PLOS BIOLOGY

A novel translational control mechanism involving RNA structures within coding sequences

(2016) Jennifer Jungfleisch et al.   GENOME RESEARCH

Nucleocytoplasmic Transport of RNAs and RNA–Protein Complexes

(2016) Katherine E. Sloan et al.   JOURNAL OF MOLECULAR BIOLOGY

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes

(2016) Shan Wu et al.   NATURE

Protein cofactor competition regulates the action of a multifunctional RNA helicase in different pathways

(2016) Annika U. Heininger et al.   RNA Biology

Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function

(2016) Katherine E. Sloan et al.   RNA Biology

The DEAD-box Protein Rok1 Orchestrates 40S and 60S Ribosome Assembly by Promoting the Release of Rrp5 from Pre-40S Ribosomes to Allow for 60S Maturation

(2016) Sohail Khoshnevis et al.   PLOS BIOLOGY

Functions of Ribosomal Proteins in Assembly of Eukaryotic Ribosomes In Vivo

(2015) Jesús de la Cruz et al.   Annual Review of Biochemistry

Architecture of the Rix1–Rea1 checkpoint machinery during pre-60S-ribosome remodeling

(2015) Clara Barrio-Garcia et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Yeast Kre33 and human NAT10 are conserved 18S rRNA cytosine acetyltransferases that modify tRNAs assisted by the adaptor Tan1/THUMPD1

(2015) Sunny Sharma et al.   NUCLEIC ACIDS RESEARCH

Architecture of the Rix1–Rea1 checkpoint machinery during pre-60S-ribosome remodeling

(2015) Clara Barrio-Garcia et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The DEAH-box Helicase Dhr1 Dissociates U3 from the Pre-rRNA to Promote Formation of the Central Pseudoknot

(2015) Richa Sardana et al.   PLOS BIOLOGY

Assembly and nuclear export of pre-ribosomal particles in budding yeast

(2014) Stefan Gerhardy et al.   CHROMOSOMA

DEAD-Box RNA Helicase Dbp4 Is Required for Small-Subunit Processome Formation and Function

(2014) Sahar Soltanieh et al.   MOLECULAR AND CELLULAR BIOLOGY

Transcriptome Maps of mRNP Biogenesis Factors Define Pre-mRNA Recognition

(2014) Carlo Baejen et al.   MOLECULAR CELL

Secondary Structures of rRNAs from All Three Domains of Life

(2014) Anton S. Petrov et al.   PLoS One

A pre-ribosomal RNA interaction network involving snoRNAs and the Rok1 helicase

(2014) Roman Martin et al.   RNA

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle

(2014) Christoph Leidig et al.   Nature Communications

An overview of pre-ribosomal RNA processing in eukaryotes

(2014) Anthony K. Henras et al.   Wiley Interdisciplinary Reviews-RNA

PAR-CLIP data indicate that Nrd1-Nab3-dependent transcription termination regulates expression of hundreds of protein coding genes in yeast

(2014) Shaun Webb et al.   GENOME BIOLOGY

Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae

(2013) John L. Woolford et al.   GENETICS

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export

(2013) Yoshitaka Matsuo et al.   NATURE

Eukaryotic rpL10 drives ribosomal rotation

(2013) Sergey O. Sulima et al.   NUCLEIC ACIDS RESEARCH

Has1 regulates consecutive maturation and processing steps for assembly of 60S ribosomal subunits

(2013) Jill A. Dembowski et al.   NUCLEIC ACIDS RESEARCH

Mak5 and Ebp2 Act Together on Early Pre-60S Particles and Their Reduced Functionality Bypasses the Requirement for the Essential Pre-60S Factor Nsa1

(2013) Dagmar Pratte et al.   PLoS One

DExD/H-box RNA helicases in ribosome biogenesis

(2013) Roman Martin et al.   RNA Biology

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel

(2012) Bettina Bradatsch et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae

(2012) Jason Talkish et al.   NUCLEIC ACIDS RESEARCH

Kinetic analysis of pre-ribosome structure in vivo

(2012) A. Swiatkowska et al.   RNA

From unwinding to clamping — the DEAD box RNA helicase family

(2011) Patrick Linder et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast

(2011) G. Kudla et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Solution structures of DEAD-box RNA chaperones reveal conformational changes and nucleic acid tethering by a basic tail

(2011) A. L. Mallam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The box C/D and H/ACA snoRNPs: key players in the modification, processing and the dynamic folding of ribosomal RNA

(2011) Nicholas J. Watkins et al.   Wiley Interdisciplinary Reviews-RNA

The AAA-ATPase Rea1 Drives Removal of Biogenesis Factors during Multiple Stages of 60S Ribosome Assembly

(2010) Jochen Baßler et al.   MOLECULAR CELL

Crystal Structure of the Eukaryotic Ribosome

(2010) A. Ben-Shem et al.   SCIENCE

RNA Helicase Prp43 and Its Co-factor Pfa1 Promote 20 to 18 S rRNA Processing Catalyzed by the Endonuclease Nob1

(2009) Brigitte Pertschy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Prp43 Bound at Different Sites on the Pre-rRNA Performs Distinct Functions in Ribosome Synthesis

(2009) Markus T. Bohnsack et al.   MOLECULAR CELL

Quantitative analysis of snoRNA association with pre-ribosomes and release of snR30 by Rok1 helicase

(2008) Markus T Bohnsack et al.   EMBO REPORTS