Demographic histories and genetic diversity across pinnipeds are shaped by human exploitation, ecology and life-history

Estimating synchronous demographic changes across populations using hABC and its application for a herpetological community from northeastern Brazil

(2017) Marcelo Gehara et al.   MOLECULAR ECOLOGY

Asynchronous demographic responses to Pleistocene climate change in Eastern Nearctic vertebrates

(2016) Frank T. Burbrink et al.   ECOLOGY LETTERS

stratag: Anrpackage for manipulating, summarizing and analysing population genetic data

(2016) Frederick I. Archer et al.   Molecular Ecology Resources

Determinants of genetic diversity

(2016) Hans Ellegren et al.   NATURE REVIEWS GENETICS

Large numbers of vertebrates began rapid population decline in the late 19th century

(2016) Haipeng Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Demographic inferences using short-read genomic data in an approximate Bayesian computation framework: in silico evaluation of power, biases and proof of concept in Atlantic walrus

(2015) Aaron B. A. Shafer et al.   MOLECULAR ECOLOGY

The aggregate site frequency spectrum for comparative population genomic inference

(2015) Alexander T. Xue et al.   MOLECULAR ECOLOGY

MCMC Methods for Multi-Response Generalized Linear Mixed Models: TheMCMCglmmRPackage

(2015) Jarrod D. Hadfield   Journal of Statistical Software

DISENTANGLING THE CONTRIBUTION OF SEXUAL SELECTION AND ECOLOGY TO THE EVOLUTION OF SIZE DIMORPHISM IN PINNIPEDS

(2014) Oliver Krüger et al.   EVOLUTION

Detecting Concerted Demographic Response across Community Assemblages Using Hierarchical Approximate Bayesian Computation

(2014) Yvonne L. Chan et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative population genomics in animals uncovers the determinants of genetic diversity

(2014) J. Romiguier et al.   NATURE

Using commonality analysis in multiple regressions: a tool to decompose regression effects in the face of multicollinearity

(2014) Jayanti Ray-Mukherjee et al.   Methods in Ecology and Evolution

The number of markers and samples needed for detecting bottlenecks under realistic scenarios, with and without recovery: a simulation-based study

(2013) Sean M. Hoban et al.   MOLECULAR ECOLOGY

Meta-analysis reveals lower genetic diversity in overfished populations

(2013) Malin L. Pinsky et al.   MOLECULAR ECOLOGY

ParallelStructure: A R Package to Distribute Parallel Runs of the Population Genetics Program STRUCTURE on Multi-Core Computers

(2013) Francois Besnier et al.   PLoS One

Unexpected genetic differentiation between recently recolonized populations of a long-lived and highly vagile marine mammal

(2013) Carolina A. Bonin et al.   Ecology and Evolution

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

Demographic Inference Reveals African and European Admixture in the North American Drosophila melanogaster Population

(2012) P. Duchen et al.   GENETICS

Reliability of genetic bottleneck tests for detecting recent population declines

(2012) M. ZACHARIAH PEERY et al.   MOLECULAR ECOLOGY

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

A general and simple method for obtainingR2from generalized linear mixed-effects models

(2012) Shinichi Nakagawa et al.   Methods in Ecology and Evolution

Revisiting an Old Riddle: What Determines Genetic Diversity Levels within Species?

(2012) Ellen M. Leffler et al.   PLOS BIOLOGY

fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

(2011) Laurent Excoffier et al.   BIOINFORMATICS

Bayesian inference of a historical bottleneck in a heavily exploited marine mammal

(2011) J. I. HOFFMAN et al.   MOLECULAR ECOLOGY

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

Bayesian Inference of the Demographic History of Chimpanzees

(2010) D. Wegmann et al.   MOLECULAR BIOLOGY AND EVOLUTION

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

Simple means to improve the interpretability of regression coefficients

(2010) Holger Schielzeth   Methods in Ecology and Evolution

Effective population size and patterns of molecular evolution and variation

(2009) Brian Charlesworth   NATURE REVIEWS GENETICS

Historical baselines for large marine animals

(2009) Heike K. Lotze et al.   TRENDS IN ECOLOGY & EVOLUTION

Phylogeography across a continent: The evolutionary and demographic history of the North American racer (Serpentes: Colubridae: Coluber constrictor)

(2007) Frank T. Burbrink et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Scaling regression inputs by dividing by two standard deviations

(2007) Andrew Gelman   STATISTICS IN MEDICINE