The Major RNA-Binding Protein ProQ Impacts Virulence Gene Expression in Salmonella enterica Serovar Typhimurium

Global Maps of ProQ Binding In Vivo Reveal Target Recognition via RNA Structure and Stability Control at mRNA 3′ Ends

(2018) Erik Holmqvist et al.   MOLECULAR CELL

RNA-binding proteins in bacteria

(2018) Erik Holmqvist et al.   NATURE REVIEWS MICROBIOLOGY

Hfq chaperone brings speed dating to bacterial sRNA

(2018) Andrew Santiago-Frangos et al.   Wiley Interdisciplinary Reviews-RNA

Bacterial Noncoding RNAs Excised from within Protein-Coding Transcripts

(2018) Daniel Dar et al.   mBio

ProQ/FinO-domain proteins: another ubiquitous family of RNA matchmakers?

(2017) Mikolaj Olejniczak et al.   MOLECULAR MICROBIOLOGY

RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE

(2017) Charlotte Michaux et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of the Escherichia coli ProQ RNA-binding protein

(2017) Grecia M. Gonzalez et al.   RNA

RNA Chaperones Step Out of Hfq’s Shadow

(2017) Laetitia Attaiech et al.   TRENDS IN MICROBIOLOGY

RNA assemblages orchestrate complex cellular processes

(2016) Finn Cilius Nielsen et al.   BIOESSAYS

Global RNA recognition patterns of post‐transcriptional regulators Hfq and CsrA revealed by UV crosslinkingin vivo

(2016) Erik Holmqvist et al.   EMBO JOURNAL

tRNAPro-mediated downregulation of elongation factor P is required formgtCBRexpression duringSalmonellainfection

(2016) Daesil Nam et al.   MOLECULAR MICROBIOLOGY

Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

(2016) Alexander J. Westermann et al.   NATURE

Expansion of the Gene Ontology knowledgebase and resources

(2016)   NUCLEIC ACIDS RESEARCH

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

(2016) Alexandre Smirnov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Silencing of natural transformation by an RNA chaperone and a multitarget small RNA

(2016) Laetitia Attaiech et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of Bacterial Virulence by Csr (Rsm) Systems

(2015) Christopher A. Vakulskas et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The FinO family of bacterial RNA chaperones

(2015) J.N. Mark Glover et al.   PLASMID

An RNA motif advances transcription by preventing Rho-dependent termination

(2015) Anastasia Sevostyanova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-seq Brings New Insights to the Intra-Macrophage Transcriptome of Salmonella Typhimurium

(2015) Shabarinath Srikumar et al.   PLoS Pathogens

READemption--a tool for the computational analysis of deep-sequencing-based transcriptome data

(2014) K. U. Forstner et al.   BIOINFORMATICS

Control of a Salmonella virulence operon by proline-charged tRNAPro

(2014) E.-J. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Infection-Relevant Transcriptomic Compendium for Salmonella enterica Serovar Typhimurium

(2013) Carsten Kröger et al.   Cell Host & Microbe

Analysis and Expansion of the Role of the Escherichia coli Protein ProQ

(2013) Daniel T. Sheidy et al.   PLoS One

An RpoS-dependent sRNA regulates the expression of a chaperone involved in protein folding

(2013) I. J. Silva et al.   RNA

Identification of Salmonella Pathogenicity Island-2 Type III Secretion System Effectors Involved in Intramacrophage Replication of S. enterica Serovar Typhimurium: Implications for Rational Vaccine Design

(2013) R. Figueira et al.   mBio

Comprehensive Assignment of Roles for Salmonella Typhimurium Genes in Intestinal Colonization of Food-Producing Animals

(2013) Roy R. Chaudhuri et al.   PLoS Genetics

Salmonella Modulation of Host Cell Gene Expression Promotes Its Intracellular Growth

(2013) Sebastian Hannemann et al.   PLoS Pathogens

The Salmonella Kinase SteC Targets the MAP Kinase MEK to Regulate the Host Actin Cytoskeleton

(2012) Charlotte Odendall et al.   Cell Host & Microbe

An atlas of Hfq-bound transcripts reveals 3′ UTRs as a genomic reservoir of regulatory small RNAs

(2012) Yanjie Chao et al.   EMBO JOURNAL

Tandem attenuators control expression of theSalmonella mgtCBRvirulence operon

(2012) Eun-Jin Lee et al.   MOLECULAR MICROBIOLOGY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Dynamics ofSalmonellasmall RNA expression in non-growing bacteria located inside eukaryotic cells

(2012) Álvaro D. Ortega et al.   RNA Biology

ProQ Is an RNA Chaperone that Controls ProP Levels inEscherichia coli

(2011) Steven G. Chaulk et al.   BIOCHEMISTRY

Integration host factor alleviates H-NS silencing of the Salmonella enterica serovar Typhimurium master regulator of SPI1, hilA

(2011) M. H. Queiroz et al.   MICROBIOLOGY-SGM

Integration of a complex regulatory cascade involving the SirA/BarA and Csr global regulatory systems that controls expression of the Salmonella SPI-1 and SPI-2 virulence regulons through HilD

(2011) Luary C. Martínez et al.   MOLECULAR MICROBIOLOGY

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota

(2011) P. Thiennimitr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Bacterial mRNA Leader that Employs Different Mechanisms to Sense Disparate Intracellular Signals

(2010) Sun-Yang Park et al.   CELL

The role of Hfq in bacterial pathogens

(2010) Yanjie Chao et al.   CURRENT OPINION IN MICROBIOLOGY

An antisense RNA that governs the expression kinetics of a multifunctional virulence gene

(2010) Eun-Jin Lee et al.   MOLECULAR MICROBIOLOGY

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets

(2009) J. W. Nicol et al.   BIOINFORMATICS

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

(2009) Kai Papenfort et al.   MOLECULAR MICROBIOLOGY

Global Systems-Level Analysis of Hfq and SmpB Deletion Mutants in Salmonella: Implications for Virulence and Global Protein Translation

(2009) Charles Ansong et al.   PLoS One

Salmonella Typhimurium Type III Secretion Effectors Stimulate Innate Immune Responses in Cultured Epithelial Cells

(2009) Vincent M. Bruno et al.   PLoS Pathogens

Analysis of Pools of Targeted Salmonella Deletion Mutants Identifies Novel Genes Affecting Fitness during Competitive Infection in Mice

(2009) Carlos A. Santiviago et al.   PLoS Pathogens

During infection of epithelial cells Salmonella enterica serovar Typhimurium undergoes a time-dependent transcriptional adaptation that results in simultaneous expression of three type 3 secretion systems

(2008) I. Hautefort et al.   CELLULAR MICROBIOLOGY

SpvC is a Salmonella effector with phosphothreonine lyase activity on host mitogen-activated protein kinases

(2008) Piotr Mazurkiewicz et al.   MOLECULAR MICROBIOLOGY

Deep Sequencing Analysis of Small Noncoding RNA and mRNA Targets of the Global Post-Transcriptional Regulator, Hfq

(2008) Alexandra Sittka et al.   PLoS Genetics