Rethinking the Coral Microbiome: Simplicity Exists within a Diverse Microbial Biosphere

Benefit from decline: the primary transcriptome of Alteromonas macleodii str. Te101 during Trichodesmium demise

(2018) Shengwei Hou et al.   ISME Journal

Specific plasmid patterns and high rates of bacterial co-occurrence within the coral holobiont

(2018) Deborah C. A. Leite et al.   Ecology and Evolution

Exploring Biogeochemistry and Microbial Diversity of Extant Microbialites in Mexico and Cuba

(2018) Patricia M. Valdespino-Castillo et al.   Frontiers in Microbiology

Species richness and taxonomic distinctness of lake macrophytes along environmental gradients in two continents

(2017) Janne Alahuhta et al.   FRESHWATER BIOLOGY

Defining the Core Microbiome in Corals’ Microbial Soup

(2017) Alejandra Hernandez-Agreda et al.   TRENDS IN MICROBIOLOGY

Defining the core microbiome of the symbiotic dinoflagellate, Symbiodinium

(2017) Caitlin A. Lawson et al.   Environmental Microbiology Reports

Distinct Bacterial Communities Associated with Massive and Branching Scleractinian Corals and Potential Linkages to Coral Susceptibility to Thermal or Cold Stress

(2017) Jiayuan Liang et al.   Frontiers in Microbiology

Broadcast Spawning Coral Mussismilia hispida Can Vertically Transfer its Associated Bacterial Core

(2017) Deborah C. A. Leite et al.   Frontiers in Microbiology

Caenorhabditis elegans as a Model for Microbiome Research

(2017) Fan Zhang et al.   Frontiers in Microbiology

Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea

(2017) Norbert Englebert et al.   PLoS One

Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems

(2016) David G. Bourne et al.   Annual Review of Microbiology

Prevalence of potential nitrogen-fixing, green sulfur bacteria in the skeleton of reef-building coralIsopora palifera

(2016) Shan-Hua Yang et al.   LIMNOLOGY AND OCEANOGRAPHY

Corals' microbial sentinels

(2016) T. D. Ainsworth et al.   SCIENCE

The Microbial Signature Provides Insight into the Mechanistic Basis of Coral Success across Reef Habitats

(2016) Alejandra Hernandez-Agreda et al.   mBio

A Combination of Biochar–Mineral Complexes and Compost Improves Soil Bacterial Processes, Soil Quality, and Plant Properties

(2016) Jun Ye et al.   Frontiers in Microbiology

The Coral Trait Database, a curated database of trait information for coral species from the global oceans

(2016) Joshua S. Madin et al.   Scientific Data

Different utilization of alginate and other algal polysaccharides by marineAlteromonas macleodiiecotypes

(2015) Anna M. Neumann et al.   ENVIRONMENTAL MICROBIOLOGY

The coral core microbiome identifies rare bacterial taxa as ubiquitous endosymbionts

(2015) Tracy D Ainsworth et al.   ISME Journal

Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix

(2015) Olga Pantos et al.   ISME Journal

Coral-the world's most diverse symbiotic ecosystem

(2015) Linda L. Blackall et al.   MOLECULAR ECOLOGY

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The functional gene composition and metabolic potential of coral-associated microbial communities

(2015) Yanying Zhang et al.   Scientific Reports

Deep down on a Caribbean reef: lower mesophotic depths harbor a specialized coral-endosymbiont community

(2015) Pim Bongaerts et al.   Scientific Reports

Onset and establishment of diazotrophs and other bacterial associates in the early life history stages of the coralAcropora millepora

(2014) Kimberley A. Lema et al.   MOLECULAR ECOLOGY

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Highly Heterogeneous Bacterial Communities Associated with the South China Sea Reef Corals Porites lutea, Galaxea fascicularis and Acropora millepora

(2013) Jie Li et al.   PLoS One

Global biogeography of highly diverse protistan communities in soil

(2012) Scott T Bates et al.   ISME Journal

Taxonomical and functional diversity turnover in Mediterranean grasslands: interactions between grazing, habitat type and rainfall

(2012) Carlos P. Carmona et al.   JOURNAL OF APPLIED ECOLOGY

Intergenerational Transfer of Specific Bacteria in Corals and Possible Implications for Offspring Fitness

(2012) Janja Ceh et al.   MICROBIAL ECOLOGY

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

betapart: an R package for the study of beta diversity

(2012) Andrés Baselga et al.   Methods in Ecology and Evolution

Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph

(2012) Mario López-Pérez et al.   Scientific Reports

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Application of an indicator based on taxonomic relatedness of ciliated protozoan assemblages for marine environmental assessment

(2011) Henglong Xu et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Diversity and dynamics of bacterial communities in early life stages of the Caribbean coral Porites astreoides

(2011) Koty H Sharp et al.   ISME Journal

Correction: Interleukin 12B (IL12B) Genetic Variation and Pulmonary Tuberculosis: A Study of Cohorts from The Gambia, Guinea-Bissau, United States and Argentina

(2011) Gerard A. J. Morris et al.   PLoS One

Community ecology of mesophotic coral reef ecosystems

(2010) S. E. Kahng et al.   CORAL REEFS

Photoacclimatization by the coral Montastraea cavernosa in the mesophotic zone: light, food, and genetics

(2010) Michael P. Lesser et al.   ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Threatened Corals Provide Underexplored Microbial Habitats

(2010) Shinichi Sunagawa et al.   PLoS One

Caribbean Corals in Crisis: Record Thermal Stress, Bleaching, and Mortality in 2005

(2010) C. Mark Eakin et al.   PLoS One

Partitioning the turnover and nestedness components of beta diversity

(2009) Andrés Baselga   GLOBAL ECOLOGY AND BIOGEOGRAPHY

The onset of microbial associations in the coral Pocillopora meandrina

(2009) Amy Apprill et al.   ISME Journal

Changes in morphology and diet of the coral Stylophora pistillata along a depth gradient

(2009) S Einbinder et al.   MARINE ECOLOGY PROGRESS SERIES

Facilitation of Robust Growth of Prochlorococcus Colonies and Dilute Liquid Cultures by "Helper" Heterotrophic Bacteria

(2008) J. J. Morris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Taxonomical vs. functional responses of bee communities to fire in two contrasting climatic regions

(2008) Marco Moretti et al.   JOURNAL OF ANIMAL ECOLOGY