Mapping of the male sterile mutant gene ftms in Brassica rapa L. ssp. pekinensis via BSR-Seq combined with whole-genome resequencing

Physical mapping and candidate gene prediction of fertility restorer gene of cytoplasmic male sterility in cotton

(2018) Cunpeng Zhao et al.   BMC GENOMICS

Identification of candidate genes underlying genic male-sterile msc-1 locus via genome resequencing in Capsicum annuum L.

(2018) Qing Cheng et al.   THEORETICAL AND APPLIED GENETICS

Development of Molecular Markers Linked to Powdery Mildew Resistance Gene Pm4b by Combining SNP Discovery from Transcriptome Sequencing Data with Bulked Segregant Analysis (BSR-Seq) in Wheat

(2018) Peipei Wu et al.   Frontiers in Plant Science

The cotton β-galactosyltransferase 1 (GalT1) that galactosylates arabinogalactan proteins participates in controlling fiber development

(2017) Li-Xia Qin et al.   PLANT JOURNAL

Identification and fine mapping of a stay-green gene (Brnye1) in pakchoi (Brassica campestris L. ssp. chinensis)

(2017) Nan Wang et al.   THEORETICAL AND APPLIED GENETICS

Recessive male sterility in cabbage (Brassica oleracea var. capitata) caused by loss of function of BoCYP704B1 due to the insertion of a LTR-retrotransposon

(2017) Jia-lei Ji et al.   THEORETICAL AND APPLIED GENETICS

Mapping stripe rust resistance gene YrZH22 in Chinese wheat cultivar Zhoumai 22 by bulked segregant RNA-Seq (BSR-Seq) and comparative genomics analyses

(2017) Yong Wang et al.   THEORETICAL AND APPLIED GENETICS

Bulked Segregant RNA-seq Reveals Differential Expression and SNPs of Candidate Genes Associated with Waterlogging Tolerance in Maize

(2017) Hewei Du et al.   Frontiers in Plant Science

Mapping and Identifying a Candidate Gene (Bnmfs) for Female-Male Sterility through Whole-Genome Resequencing and RNA-Seq in Rapeseed (Brassica napus L.)

(2017) Changcai Teng et al.   Frontiers in Plant Science

KNS4/UPEX1: A Type II Arabinogalactan β -(1,3)-Galactosyltransferase Required for Pollen Exine Development

(2016) Toshiya Suzuki et al.   PLANT PHYSIOLOGY

IRREGULAR POLLEN EXINE1 Is a Novel Factor in Anther Cuticle and Pollen Exine Formation

(2016) Xiaoyang Chen et al.   PLANT PHYSIOLOGY

Map-based cloning of the dominant genic male sterile Ms-cd1 gene in cabbage (Brassica oleracea)

(2016) Jianli Liang et al.   THEORETICAL AND APPLIED GENETICS

Identification of Genes Potentially Associated with the Fertility Instability of S-Type Cytoplasmic Male Sterility in Maize via Bulked Segregant RNA-Seq

(2016) Aiguo Su et al.   PLoS One

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

BcMF8, a putative arabinogalactan protein-encoding gene, contributes to pollen wall development, aperture formation and pollen tube growth in Brassica campestris

(2014) Sue Lin et al.   ANNALS OF BOTANY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A rapid and effective method for silver staining of PCR products separated in polyacrylamide gels

(2014) Qingzhi Liang et al.   ELECTROPHORESIS

Identification of centromeric regions on the linkage map of cotton using centromere-related repeats

(2014) Wenpan Zhang et al.   GENOMICS

RNA-Seq bulked segregant analysis enables the identification of high-resolution genetic markers for breeding in hexaploid wheat

(2014) Ricardo H. Ramirez-Gonzalez et al.   PLANT BIOTECHNOLOGY JOURNAL

Screening of Chinese cabbage mutants produced by60Co γ-ray mutagenesis of isolated microspore cultures

(2014) Shengnan Huang et al.   PLANT BREEDING

Roothairless5, which functions in maize (Zea maysL.) root hair initiation and elongation encodes a monocot-specific NADPH oxidase

(2014) Josefine Nestler et al.   PLANT JOURNAL

Fine mapping of a dominant thermo-sensitive genic male sterility gene (BntsMs) in rapeseed (Brassica napus) with AFLP- and Brassica rapa-derived PCR markers

(2014) Xinhua Zeng et al.   THEORETICAL AND APPLIED GENETICS

A high-resolution linkage map of the Rfd1, a restorer-of-fertility locus for cytoplasmic male sterility in radish (Raphanus sativus L.) produced by a combination of bulked segregant analysis and RNA-Seq

(2014) Young-Pyo Lee et al.   THEORETICAL AND APPLIED GENETICS

RNase ZS1 processes Ub L40 mRNAs and controls thermosensitive genic male sterility in rice

(2014) Hai Zhou et al.   Nature Communications

Male Sterility and Fertility Restoration in Crops

(2013) Letian Chen et al.   Annual Review of Plant Biology

BSTA: a targeted approach combines bulked segregant analysis with next- generation sequencing and de novo transcriptome assembly for SNP discovery in sunflower

(2013) Maren Livaja et al.   BMC GENOMICS

Deciphering the Diploid Ancestral Genome of the MesohexaploidBrassica rapa

(2013) Feng Cheng et al.   PLANT CELL

The Maize glossy13 Gene, Cloned via BSR-Seq and Seq-Walking Encodes a Putative ABC Transporter Required for the Normal Accumulation of Epicuticular Waxes

(2013) Li Li et al.   PLoS One

Maize Male sterile 8 (Ms8), a putative β-1,3-galactosyltransferase, modulates cell division, expansion, and differentiation during early maize anther development

(2013) Dongxue Wang et al.   Plant Reproduction

A triallelic genetic male sterility locus in Brassica napus: an integrative strategy for its physical mapping and possible local chromosome evolution around it

(2012) Wei Lu et al.   ANNALS OF BOTANY

Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA

(2012) Hai Zhou et al.   CELL RESEARCH

Gene Mapping via Bulked Segregant RNA-Seq (BSR-Seq)

(2012) Sanzhen Liu et al.   PLoS One

Map-based cloning of a recessive genic male sterility locus in Brassica napus L. and development of its functional marker

(2012) Ji Li et al.   THEORETICAL AND APPLIED GENETICS

BnMs3 is required for tapetal differentiation and degradation, microspore separation, and pollen-wall biosynthesis in Brassica napus

(2011) Zhengfu Zhou et al.   JOURNAL OF EXPERIMENTAL BOTANY

The final split: the regulation of anther dehiscence

(2011) Z. A. Wilson et al.   JOURNAL OF EXPERIMENTAL BOTANY

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

BnaC.Tic40, a plastid inner membrane translocon originating from Brassica oleracea, is essential for tapetal function and microspore development in Brassica napus

(2011) Xiaoling Dun et al.   PLANT JOURNAL

NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION Is Essential for Primexine Deposition and Plasma Membrane Undulation during Microsporogenesis in Arabidopsis

(2011) H.-S. Chang et al.   PLANT PHYSIOLOGY

Combining genetical genomics and bulked segregant analysis-based differential expression: an approach to gene localization

(2011) Xinwei Chen et al.   THEORETICAL AND APPLIED GENETICS

Efficiency of selective genotyping for genetic analysis of complex traits and potential applications in crop improvement

(2010) Yanping Sun et al.   MOLECULAR BREEDING

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

Two duplicate CYP704B1-homologous genes BnMs1 and BnMs2 are required for pollen exine formation and tapetal development in Brassica napus

(2010) Bin Yi et al.   PLANT JOURNAL

An ABCG/WBC-type ABC transporter is essential for transport of sporopollenin precursors for exine formation in developing pollen

(2010) Hyunju Choi et al.   PLANT JOURNAL

LAP5 and LAP6 Encode Anther-Specific Proteins with Similarity to Chalcone Synthase Essential for Pollen Exine Development in Arabidopsis

(2010) A. A. Dobritsa et al.   PLANT PHYSIOLOGY

Breeding Technologies to Increase Crop Production in a Changing World

(2010) M. Tester et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Pollen grain development is compromised in Arabidopsis agp6 agp11 null mutants

(2009) S. Coimbra et al.   JOURNAL OF EXPERIMENTAL BOTANY

CYP704B1 Is a Long-Chain Fatty Acid  -Hydroxylase Essential for Sporopollenin Synthesis in Pollen of Arabidopsis

(2009) A. A. Dobritsa et al.   PLANT PHYSIOLOGY

Maize Centromere Structure and Evolution: Sequence Analysis of Centromeres 2 and 5 Reveals Dynamic Loci Shaped Primarily by Retrotransposons

(2009) Thomas K. Wolfgruber et al.   PLoS Genetics

Functional expression of five Arabidopsis fatty acyl-CoA reductase genes in Escherichia coli

(2008) Thuy T.P. Doan et al.   JOURNAL OF PLANT PHYSIOLOGY

Defective in Tapetal Development and Function 1is essential for anther development and tapetal function for microspore maturation in Arabidopsis

(2008) Jun Zhu et al.   PLANT JOURNAL

RUPTURED POLLEN GRAIN1, a Member of the MtN3/saliva Gene Family, Is Crucial for Exine Pattern Formation and Cell Integrity of Microspores in Arabidopsis

(2008) Y.-F. Guan et al.   PLANT PHYSIOLOGY