- Home
- Publications
- Publication Search
- Publication Details
Title
The in silico human surfaceome
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 115, Issue 46, Pages E10988-E10997
Publisher
Proceedings of the National Academy of Sciences
Online
2018-10-30
DOI
10.1073/pnas.1808790115
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Highly multiplexed and quantitative cell-surface protein profiling using genetically barcoded antibodies
- (2018) Samuel B. Pollock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic analysis of protein turnover in primary cells
- (2018) Toby Mathieson et al. Nature Communications
- GeneGini: Assessment via the Gini Coefficient of Reference “Housekeeping” Genes and Diverse Human Transporter Expression Profiles
- (2018) Steve O'Hagan et al. Cell Systems
- Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells
- (2017) Yuanyuan Li et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- HEMO, an ancestral endogenous retroviral envelope protein shed in the blood of pregnant women and expressed in pluripotent stem cells and tumors
- (2017) Odile Heidmann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A subcellular map of the human proteome
- (2017) Peter J. Thul et al. SCIENCE
- Gene‐specific correlation of RNA and protein levels in human cells and tissues
- (2016) Fredrik Edfors et al. Molecular Systems Biology
- Exploring the surfaceome of Ewing sarcoma identifies a new and unique therapeutic target
- (2016) Jennifer Town et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types
- (2016) André L. Fonseca et al. International Journal of Genomics
- GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome
- (2015) Fuyi Li et al. BIOINFORMATICS
- Evaluation of transmembrane helix predictions in 2014
- (2015) Jonas Reeb et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Structural Basis of Latrophilin-FLRT-UNC5 Interaction in Cell Adhesion
- (2015) Yue C. Lu et al. STRUCTURE
- A Mass Spectrometric-Derived Cell Surface Protein Atlas
- (2015) Damaris Bausch-Fluck et al. PLoS One
- Identification and Functional Characterization of pVHL-Dependent Cell Surface Proteins in Renal Cell Carcinoma
- (2015) Gunther Boysen et al. NEOPLASIA
- A comprehensive transcriptional portrait of human cancer cell lines
- (2014) Christiaan Klijn et al. NATURE BIOTECHNOLOGY
- N-glycoprotein surfaceomes of four developmentally distinct mouse cell types
- (2014) Erin M. Kropp et al. Proteomics Clinical Applications
- COMPARTMENTS: unification and visualization of protein subcellular localization evidence
- (2014) J. X. Binder et al. Database-The Journal of Biological Databases and Curation
- Malfunctioning of adipocytes in obesity is linked to quantitative surfaceome changes
- (2013) Hansjoerg Moest et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- Leukemia surfaceome analysis reveals new disease-associated features
- (2013) P. Mirkowska et al. BLOOD
- Tetraspanins as regulators of the tumour microenvironment: implications for metastasis and therapeutic strategies
- (2013) S Detchokul et al. BRITISH JOURNAL OF PHARMACOLOGY
- Surfaceome Profiling Reveals Regulators of Neural Stem Cell Function
- (2013) Brian DeVeale et al. STEM CELLS
- Gap junction proteins: Master regulators of the planarian stem cell response to tissue maintenance and injury
- (2012) T. Harshani Peiris et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Subcellular localization prediction for human internal and organelle membrane proteins with projected gene ontology scores
- (2012) Pufeng Du et al. JOURNAL OF THEORETICAL BIOLOGY
- Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics
- (2012) Amelia C. Peterson et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
- (2012) Ludovic C. Gillet et al. MOLECULAR & CELLULAR PROTEOMICS
- Vertebrate protein glycosylation: diversity, synthesis and function
- (2012) Kelley W. Moremen et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- A guideline to proteome-wide α-helical membrane protein topology predictions
- (2012) Konstantinos D. Tsirigos et al. PROTEOMICS
- MemLoci: predicting subcellular localization of membrane proteins in eukaryotes
- (2011) Andrea Pierleoni et al. BIOINFORMATICS
- CD proteome and beyond - technologies for targeting the immune cell surfaceome
- (2011) Thomas Bock Frontiers in Bioscience-Landmark
- Proteomic surfaceome analysis of mesothelioma
- (2011) Annemarie Ziegler et al. LUNG CANCER
- The quantitative proteome of a human cell line
- (2011) M. Beck et al. Molecular Systems Biology
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- SignalP 4.0: discriminating signal peptides from transmembrane regions
- (2011) Thomas Nordahl Petersen et al. NATURE METHODS
- Proteomic cell surface phenotyping of differentiating acute myeloid leukemia cells
- (2010) A. Hofmann et al. BLOOD
- A Comprehensive Comparison of Transmembrane Domains Reveals Organelle-Specific Properties
- (2010) Hayley J. Sharpe et al. CELL
- Towards a comprehensive human cell-surface immunome database
- (2010) M. Carmen Díaz-Ramos et al. IMMUNOLOGY LETTERS
- On the Development of Plasma Protein Biomarkers
- (2010) Silvia Surinova et al. JOURNAL OF PROTEOME RESEARCH
- YLoc—an interpretable web server for predicting subcellular localization
- (2010) Sebastian Briesemeister et al. NUCLEIC ACIDS RESEARCH
- Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin
- (2009) Markus Almén et al. BMC BIOLOGY
- The Mouse C2C12 Myoblast Cell SurfaceN-Linked Glycoproteome
- (2009) Rebekah L. Gundry et al. MOLECULAR & CELLULAR PROTEOMICS
- Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins
- (2009) Bernd Wollscheid et al. NATURE BIOTECHNOLOGY
- Bioinformatics construction of the human cell surfaceome
- (2009) J. P. C. da Cunha et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar
- (2008) Håkan Viklund et al. BIOINFORMATICS
- Comparative Proteomic Phenotyping of Cell Lines and Primary Cells to Assess Preservation of Cell Type-specific Functions
- (2008) Cuiping Pan et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted proteomic strategy for clinical biomarker discovery
- (2008) Ralph Schiess et al. Molecular Oncology
- Use and misuse of the gene ontology annotations
- (2008) Seung Yon Rhee et al. NATURE REVIEWS GENETICS
- A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface
- (2008) Rebekah L. Gundry et al. Proteomics Clinical Applications
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search