标题
The in silico human surfaceome
作者
关键词
-
出版物
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 115, Issue 46, Pages E10988-E10997
出版商
Proceedings of the National Academy of Sciences
发表日期
2018-10-30
DOI
10.1073/pnas.1808790115
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Highly multiplexed and quantitative cell-surface protein profiling using genetically barcoded antibodies
- (2018) Samuel B. Pollock et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic analysis of protein turnover in primary cells
- (2018) Toby Mathieson et al. Nature Communications
- GeneGini: Assessment via the Gini Coefficient of Reference “Housekeeping” Genes and Diverse Human Transporter Expression Profiles
- (2018) Steve O'Hagan et al. Cell Systems
- Transcriptome analysis reveals determinant stages controlling human embryonic stem cell commitment to neuronal cells
- (2017) Yuanyuan Li et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- HEMO, an ancestral endogenous retroviral envelope protein shed in the blood of pregnant women and expressed in pluripotent stem cells and tumors
- (2017) Odile Heidmann et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A subcellular map of the human proteome
- (2017) Peter J. Thul et al. SCIENCE
- Gene‐specific correlation of RNA and protein levels in human cells and tissues
- (2016) Fredrik Edfors et al. Molecular Systems Biology
- Exploring the surfaceome of Ewing sarcoma identifies a new and unique therapeutic target
- (2016) Jennifer Town et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bioinformatics Analysis of the Human Surfaceome Reveals New Targets for a Variety of Tumor Types
- (2016) André L. Fonseca et al. International Journal of Genomics
- GlycoMine: a machine learning-based approach for predicting N-, C- and O-linked glycosylation in the human proteome
- (2015) Fuyi Li et al. BIOINFORMATICS
- Evaluation of transmembrane helix predictions in 2014
- (2015) Jonas Reeb et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Structural Basis of Latrophilin-FLRT-UNC5 Interaction in Cell Adhesion
- (2015) Yue C. Lu et al. STRUCTURE
- A Mass Spectrometric-Derived Cell Surface Protein Atlas
- (2015) Damaris Bausch-Fluck et al. PLoS One
- Identification and Functional Characterization of pVHL-Dependent Cell Surface Proteins in Renal Cell Carcinoma
- (2015) Gunther Boysen et al. NEOPLASIA
- A comprehensive transcriptional portrait of human cancer cell lines
- (2014) Christiaan Klijn et al. NATURE BIOTECHNOLOGY
- N-glycoprotein surfaceomes of four developmentally distinct mouse cell types
- (2014) Erin M. Kropp et al. Proteomics Clinical Applications
- COMPARTMENTS: unification and visualization of protein subcellular localization evidence
- (2014) J. X. Binder et al. Database-The Journal of Biological Databases and Curation
- Malfunctioning of adipocytes in obesity is linked to quantitative surfaceome changes
- (2013) Hansjoerg Moest et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- Leukemia surfaceome analysis reveals new disease-associated features
- (2013) P. Mirkowska et al. BLOOD
- Tetraspanins as regulators of the tumour microenvironment: implications for metastasis and therapeutic strategies
- (2013) S Detchokul et al. BRITISH JOURNAL OF PHARMACOLOGY
- Surfaceome Profiling Reveals Regulators of Neural Stem Cell Function
- (2013) Brian DeVeale et al. STEM CELLS
- Gap junction proteins: Master regulators of the planarian stem cell response to tissue maintenance and injury
- (2012) T. Harshani Peiris et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Subcellular localization prediction for human internal and organelle membrane proteins with projected gene ontology scores
- (2012) Pufeng Du et al. JOURNAL OF THEORETICAL BIOLOGY
- Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics
- (2012) Amelia C. Peterson et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
- (2012) Ludovic C. Gillet et al. MOLECULAR & CELLULAR PROTEOMICS
- Vertebrate protein glycosylation: diversity, synthesis and function
- (2012) Kelley W. Moremen et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- A guideline to proteome-wide α-helical membrane protein topology predictions
- (2012) Konstantinos D. Tsirigos et al. PROTEOMICS
- MemLoci: predicting subcellular localization of membrane proteins in eukaryotes
- (2011) Andrea Pierleoni et al. BIOINFORMATICS
- CD proteome and beyond - technologies for targeting the immune cell surfaceome
- (2011) Thomas Bock Frontiers in Bioscience-Landmark
- Proteomic surfaceome analysis of mesothelioma
- (2011) Annemarie Ziegler et al. LUNG CANCER
- The quantitative proteome of a human cell line
- (2011) M. Beck et al. Molecular Systems Biology
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- SignalP 4.0: discriminating signal peptides from transmembrane regions
- (2011) Thomas Nordahl Petersen et al. NATURE METHODS
- Proteomic cell surface phenotyping of differentiating acute myeloid leukemia cells
- (2010) A. Hofmann et al. BLOOD
- A Comprehensive Comparison of Transmembrane Domains Reveals Organelle-Specific Properties
- (2010) Hayley J. Sharpe et al. CELL
- Towards a comprehensive human cell-surface immunome database
- (2010) M. Carmen Díaz-Ramos et al. IMMUNOLOGY LETTERS
- On the Development of Plasma Protein Biomarkers
- (2010) Silvia Surinova et al. JOURNAL OF PROTEOME RESEARCH
- YLoc—an interpretable web server for predicting subcellular localization
- (2010) Sebastian Briesemeister et al. NUCLEIC ACIDS RESEARCH
- Mapping the human membrane proteome: a majority of the human membrane proteins can be classified according to function and evolutionary origin
- (2009) Markus Almén et al. BMC BIOLOGY
- The Mouse C2C12 Myoblast Cell SurfaceN-Linked Glycoproteome
- (2009) Rebekah L. Gundry et al. MOLECULAR & CELLULAR PROTEOMICS
- Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins
- (2009) Bernd Wollscheid et al. NATURE BIOTECHNOLOGY
- Bioinformatics construction of the human cell surfaceome
- (2009) J. P. C. da Cunha et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar
- (2008) Håkan Viklund et al. BIOINFORMATICS
- Comparative Proteomic Phenotyping of Cell Lines and Primary Cells to Assess Preservation of Cell Type-specific Functions
- (2008) Cuiping Pan et al. MOLECULAR & CELLULAR PROTEOMICS
- Targeted proteomic strategy for clinical biomarker discovery
- (2008) Ralph Schiess et al. Molecular Oncology
- Use and misuse of the gene ontology annotations
- (2008) Seung Yon Rhee et al. NATURE REVIEWS GENETICS
- A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface
- (2008) Rebekah L. Gundry et al. Proteomics Clinical Applications
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