An End-to-end System for Automatic Characterization of Iba1 Immunopositive Microglia in Whole Slide Imaging

Age at injury and genotype modify acute inflammatory and neurofilament-light responses to mild CHIMERA traumatic brain injury in wild-type and APP/PS1 mice

(2018) Wai Hang Cheng et al.   EXPERIMENTAL NEUROLOGY

Automatic Grading of Prostate Cancer in Digitized Histopathology Images: Learning from Multiple Experts

(2018) Guy Nir et al.   MEDICAL IMAGE ANALYSIS

Defining the biomechanical and biological threshold of murine mild traumatic brain injury using CHIMERA (Closed Head Impact Model of Engineered Rotational Acceleration)

(2017) Dhananjay R. Namjoshi et al.   EXPERIMENTAL NEUROLOGY

Novel Methods for Microglia Segmentation, Feature Extraction, and Classification

(2017) Yuchun Ding et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

A survey on deep learning in medical image analysis

(2017) Geert Litjens et al.   MEDICAL IMAGE ANALYSIS

Imaging of Glial Cell Activation and White Matter Integrity in Brains of Active and Recently Retired National Football League Players

(2017) Jennifer M. Coughlin et al.   JAMA Neurology

Locality Sensitive Deep Learning for Detection and Classification of Nuclei in Routine Colon Cancer Histology Images

(2016) Korsuk Sirinukunwattana et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Microglial neuroinflammation contributes to tau accumulation in chronic traumatic encephalopathy

(2016) Jonathan D. Cherry et al.   Acta Neuropathologica Communications

Significant glial alterations in response to iron loading in a novel organotypic hippocampal slice culture model

(2016) Sinead Healy et al.   Scientific Reports

Strategies to improve quantitative assessment of immunohistochemical and immunofluorescent labelling

(2015) Sarah J. Johnson et al.   Scientific Reports

The Glasgow Coma Scale at 40 years: standing the test of time

(2014) Graham Teasdale et al.   LANCET NEUROLOGY

Merging pathology with biomechanics using CHIMERA (Closed-Head Impact Model of Engineered Rotational Acceleration): a novel, surgery-free model of traumatic brain injury

(2014) Dhananjay R Namjoshi et al.   Molecular Neurodegeneration

Histological Quantitation of Brain Injury Using Whole Slide Imaging: A Pilot Validation Study in Mice

(2014) Zhenzhou Chen et al.   PLoS One

Chronic traumatic encephalopathy: a spectrum of neuropathological changes following repetitive brain trauma in athletes and military personnel

(2014) Thor D Stein et al.   Alzheimers Research & Therapy

Inflammation and white matter degeneration persist for years after a single traumatic brain injury

(2013) Victoria E. Johnson et al.   BRAIN

Geodesic voting for the automatic extraction of tree structures. Methods and applications

(2013) Youssef Rouchdy et al.   COMPUTER VISION AND IMAGE UNDERSTANDING

Quantitating the subtleties of microglial morphology with fractal analysis

(2013) Audrey Karperien et al.   Frontiers in Cellular Neuroscience

The spectrum of disease in chronic traumatic encephalopathy

(2012) Ann C. McKee et al.   BRAIN

Multistage histopathological image segmentation of Iba1-stained murine microglias in a focal ischemia model: Methodological workflow and expert validation

(2012) Nektarios A. Valous et al.   JOURNAL OF NEUROSCIENCE METHODS

Enhanced cortical expression of myeloid differentiation primary response protein 88 (Myd88) in patients with traumatic brain injury

(2012) Wei Li et al.   JOURNAL OF SURGICAL RESEARCH

An Automated Method to Quantify Microglia Morphology and Application to Monitor Activation State Longitudinally In Vivo

(2012) Cleopatra Kozlowski et al.   PLoS One

Inflammation after trauma: Microglial activation and traumatic brain injury

(2011) Anil F. Ramlackhansingh et al.   ANNALS OF NEUROLOGY

Digital Imaging in Pathology: Whole-Slide Imaging and Beyond

(2011) Farzad Ghaznavi et al.   Annual Review of Pathology-Mechanisms of Disease

A prior feature SVM-MRF based method for mouse brain segmentation

(2011) Teresa Wu et al.   NEUROIMAGE

Physiology of Microglia

(2011) Helmut Kettenmann et al.   PHYSIOLOGICAL REVIEWS

Chronic Traumatic Encephalopathy in Athletes: Progressive Tauopathy After Repetitive Head Injury

(2009) Ann C. McKee et al.   JOURNAL OF NEUROPATHOLOGY AND EXPERIMENTAL NEUROLOGY

Automated segmentation of mouse brain images using extended MRF

(2009) Min Hyeok Bae et al.   NEUROIMAGE