Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
Authors
Keywords
-
Journal
NATURE BIOTECHNOLOGY
Volume 36, Issue 12, Pages 1197-1202
Publisher
Springer Nature
Online
2018-10-15
DOI
10.1038/nbt.4259
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Nanopore sequencing and assembly of a human genome with ultra-long reads
- (2018) Miten Jain et al. NATURE BIOTECHNOLOGY
- Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome
- (2017) Hagen Tilgner et al. GENOME RESEARCH
- Single-Cell Alternative Splicing Analysis with Expedition Reveals Splicing Dynamics during Neuron Differentiation
- (2017) Yan Song et al. MOLECULAR CELL
- Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
- (2017) Hyun Min Kang et al. NATURE BIOTECHNOLOGY
- Annotation-free quantification of RNA splicing using LeafCutter
- (2017) Yang I. Li et al. NATURE GENETICS
- Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
- (2017) Ashley Byrne et al. Nature Communications
- Massively parallel digital transcriptional profiling of single cells
- (2017) Grace X. Y. Zheng et al. Nature Communications
- Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse
- (2016) Ye Zhang et al. NEURON
- Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain
- (2016) B. B. Lake et al. SCIENCE
- A new view of transcriptome complexity and regulation through the lens of local splicing variations
- (2016) Jorge Vaquero-Garcia et al. eLife
- Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations
- (2016) Spyros Oikonomopoulos et al. Scientific Reports
- Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events
- (2015) Hagen Tilgner et al. NATURE BIOTECHNOLOGY
- Spatial reconstruction of single-cell gene expression data
- (2015) Rahul Satija et al. NATURE BIOTECHNOLOGY
- Cell type– and brain region–resolved mouse brain proteome
- (2015) Kirti Sharma et al. NATURE NEUROSCIENCE
- Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation
- (2015) Nuala A. O'Leary et al. NUCLEIC ACIDS RESEARCH
- A survey of human brain transcriptome diversity at the single cell level
- (2015) Spyros Darmanis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
- (2015) A. Zeisel et al. SCIENCE
- Assessing long-distance RNA sequence connectivity via RNA-templated DNA–DNA ligation
- (2015) Christian K Roy et al. eLife
- Development of the cerebellum: simple steps to make a 'little brain'
- (2014) T. Butts et al. DEVELOPMENT
- Growth and differentiation factor 10 (Gdf10) is involved in Bergmann glial cell development underShhregulation
- (2014) Nora Mecklenburg et al. GLIA
- Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex
- (2014) Alex A Pollen et al. NATURE BIOTECHNOLOGY
- Full-length RNA-seq from single cells using Smart-seq2
- (2014) Simone Picelli et al. Nature Protocols
- Targeted Combinatorial Alternative Splicing Generates Brain Region-Specific Repertoires of Neurexins
- (2014) Dietmar Schreiner et al. NEURON
- Defining a personal, allele-specific, and single-molecule long-read transcriptome
- (2014) Hagen Tilgner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cartography of neurexin alternative splicing mapped by single-molecule long-read mRNA sequencing
- (2014) Barbara Treutlein et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types
- (2014) D. A. Jaitin et al. SCIENCE
- Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
- (2013) Alex K. Shalek et al. NATURE
- A single-molecule long-read survey of the human transcriptome
- (2013) Donald Sharon et al. NATURE BIOTECHNOLOGY
- The UCSC Genome Browser database: 2014 update
- (2013) Donna Karolchik et al. NUCLEIC ACIDS RESEARCH
- Characterization of the human ESC transcriptome by hybrid sequencing
- (2013) K. F. Au et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Accurate Identification and Analysis of Human mRNA Isoforms Using Deep Long Read Sequencing
- (2013) Hagen Tilgner et al. G3-Genes Genomes Genetics
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- Hybrid error correction and de novo assembly of single-molecule sequencing reads
- (2012) Sergey Koren et al. NATURE BIOTECHNOLOGY
- Misregulated alternative splicing of BIN1 is associated with T tubule alterations and muscle weakness in myotonic dystrophy
- (2011) Charlotte Fugier et al. NATURE MEDICINE
- Identification of Novel Glial Genes by Single-Cell Transcriptional Profiling of Bergmann Glial Cells from Mouse Cerebellum
- (2010) Samir Koirala et al. PLoS One
- Global analysis of trans-splicing in Drosophila
- (2010) C. J. McManus et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started